Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.76□□□□□ -1.49
PDLIM1O00151 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.76□□□□□ -1.49
PDLIM1O00151 MIR6085-201ENST00000618314 110 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC007603.3-201ENST00000636915 979 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM1O00151 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.76□□□□□ -1.49
PDLIM1O00151 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
PDLIM1O00151 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM1O00151 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM1O00151 ABCC13-202ENST00000463099 3842 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM1O00151 GVINP1-202ENST00000531871 7271 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.75□□□□□ -1.49
PDLIM1O00151 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 AC005702.3-201ENST00000585345 1447 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 RN7SKP145-201ENST00000363291 303 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 RNU1-84P-201ENST00000365447 164 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 SNORA64.3-201ENST00000365647 134 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 MIR191-201ENST00000384873 92 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC245036.1-201ENST00000391727 309 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 RN7SKP38-201ENST00000410782 309 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 RN7SKP286-201ENST00000410894 299 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM1O00151 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM1O00151 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 AC092601.1-201ENST00000444526 383 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM1O00151 RBMY2HP-201ENST00000457961 720 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 NPM1P29-201ENST00000483112 803 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PDLIM1O00151 TRBV5-2-201ENST00000489095 273 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.75□□□□□ -1.49
PDLIM1O00151 RPS26P24-201ENST00000497656 331 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC092349.1-201ENST00000504903 310 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC018645.1-201ENST00000505003 109 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 AC021733.2-201ENST00000518830 497 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AL133399.1-201ENST00000527476 298 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PDLIM1O00151 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
PDLIM1O00151 RPL3P13-201ENST00000550415 216 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM1O00151 AC127381.1-201ENST00000555979 939 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 TPRX1P1-201ENST00000557620 319 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC037479.1-201ENST00000558361 625 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 ZNF322P1-201ENST00000568013 1209 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC133552.4-201ENST00000576103 676 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.75□□□□□ -1.49
PDLIM1O00151 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 AC007786.3-201ENST00000615154 596 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PDLIM1O00151 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PDLIM1O00151 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PDLIM1O00151 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.75□□□□□ -1.49
PDLIM1O00151 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PDLIM1O00151 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 AC083899.1-201ENST00000454465 3819 ntBASIC5.75□□□□□ -1.49
PDLIM1O00151 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM1O00151 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM1O00151 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.74□□□□□ -1.49
PDLIM1O00151 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM1O00151 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM1O00151 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
PDLIM1O00151 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM1O00151 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM1O00151 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM1O00151 SNORD16-201ENST00000362803 99 ntBASIC5.74□□□□□ -1.49
PDLIM1O00151 RN7SKP221-201ENST00000410420 301 ntBASIC5.74□□□□□ -1.49
PDLIM1O00151 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.74□□□□□ -1.49
PDLIM1O00151 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM1O00151 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM1O00151 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM1O00151 AC013410.1-201ENST00000436223 1232 ntBASIC5.74□□□□□ -1.49
PDLIM1O00151 AC016908.1-201ENST00000442571 1219 ntBASIC5.74□□□□□ -1.49
PDLIM1O00151 RANP2-201ENST00000456833 229 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms