Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 HMGB3P19-201ENST00000403971 560 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL592310.1-201ENST00000414330 671 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL139415.1-201ENST00000424862 352 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC092646.1-201ENST00000427142 901 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC006994.1-201ENST00000438212 839 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL158214.1-201ENST00000444423 404 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 EIF2S2P2-201ENST00000447161 982 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 RAB28P3-201ENST00000448325 597 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 RPL23AP23-201ENST00000452590 471 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC079193.1-201ENST00000460497 588 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC105918.1-201ENST00000474399 838 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 HMGB1P38-201ENST00000490557 577 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC018639.1-201ENST00000492994 442 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 SNX18P23-201ENST00000510867 677 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC112673.1-201ENST00000513168 575 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AP004607.5-201ENST00000532034 217 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 NF1P12-201ENST00000549593 583 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC023825.1-201ENST00000566704 1030 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC107993.1-201ENST00000591343 684 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL450336.1-201ENST00000605180 586 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 OR7A19P-201ENST00000608051 733 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC093783.1-201ENST00000612976 329 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC004241.2-201ENST00000614562 444 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AP000473.2-201ENST00000602659 1537 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 AC110373.1-201ENST00000505994 3505 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 RAD1P1-201ENST00000231383 813 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AP002530.1-201ENST00000405705 684 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL049697.3-201ENST00000406493 982 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 RN7SKP17-201ENST00000411242 351 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 OR51B3P-201ENST00000412287 913 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC009303.1-201ENST00000426307 352 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC007563.3-201ENST00000433233 371 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 RPL14P5-201ENST00000436474 730 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC009518.3-201ENST00000438972 253 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL591719.1-201ENST00000444669 744 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL031313.1-201ENST00000448435 256 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 HMGB1P26-201ENST00000452520 628 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 RN7SL216P-201ENST00000471607 298 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC021106.1-201ENST00000509020 1058 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 MTCYBP44-201ENST00000514835 823 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 OR52K3P-201ENST00000531655 943 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 MRPS36P5-201ENST00000551909 298 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms