Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF519P2-201ENST00000557032 169 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 MIR4666A-201ENST00000580160 79 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RN7SL49P-201ENST00000581392 298 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CYCSP1-201ENST00000604815 315 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC022001.1-201ENST00000605193 268 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC004852.1-201ENST00000605206 154 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC068276.1-201ENST00000605793 379 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC103724.4-201ENST00000605981 292 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC012360.2-201ENST00000609349 391 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC023158.2-201ENST00000614876 543 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 MIR7844-201ENST00000616161 122 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RN7SL680P-201ENST00000620379 299 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC241377.2-202ENST00000636462 997 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 PDZK1P1-202ENST00000425209 1350 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AL049634.1-201ENST00000453770 1720 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC139426.3-201ENST00000605648 2059 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 VTA1P1-201ENST00000414044 866 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC023141.10-201ENST00000415634 200 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RNGTTP1-201ENST00000420965 728 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 PMS2P9-201ENST00000441237 515 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AL671855.1-201ENST00000446875 1203 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AL592447.1-201ENST00000447592 540 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 FAR2P1-206ENST00000449736 709 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RNA5SP269-201ENST00000459032 137 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RPL5P24-201ENST00000463742 885 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RPL23P10-201ENST00000468780 412 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RPL31P58-201ENST00000469001 379 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 PDCL3P4-201ENST00000489621 720 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 FCF1P3-201ENST00000496394 590 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RPL7AP2-201ENST00000496515 740 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 PSMA2P2-201ENST00000504319 686 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 PRDX4P1-201ENST00000507189 574 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC090071.1-201ENST00000507713 644 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC008496.1-201ENST00000509131 295 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 HMGB3P13-201ENST00000511263 607 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC091175.1-201ENST00000522168 572 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 IGLVI-70-201ENST00000523272 390 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AP001124.1-201ENST00000529628 385 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC124293.1-201ENST00000530034 493 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC092747.2-201ENST00000545069 983 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms