Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL080312.2-201ENST00000613001 630 ntBASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC009120.7-201ENST00000623452 780 ntBASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FBXL21-201ENST00000297158 1305 ntBASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SAMM50P1-201ENST00000455403 1399 ntBASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CASC19-255ENST00000641733 1385 ntBASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RNU4-23P-201ENST00000362839 140 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RNU1-134P-201ENST00000362935 165 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RNA5SP91-201ENST00000390902 119 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPL11P3-201ENST00000395256 523 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR4A42P-201ENST00000531397 938 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 GARSP1-201ENST00000570895 719 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC011891.2-201ENST00000604949 397 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC015712.7-201ENST00000615211 635 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL512652.1-201ENST00000619006 500 ntBASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRBV4-1A0A0J9YWV2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PSMA6P1-201ENST00000400275 741 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPS4XP5-201ENST00000419038 768 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC130360.1-201ENST00000425489 1117 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL445928.1-201ENST00000435545 222 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL512637.1-201ENST00000439523 1231 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPS23P9-201ENST00000448848 438 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPS4XP17-201ENST00000479057 754 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AGGF1P3-201ENST00000493675 1213 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC130365.2-201ENST00000525882 1201 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NPM1P5-201ENST00000557228 838 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL512413.1-201ENST00000606489 382 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC096586.2-201ENST00000610260 441 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms