Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC015820.1-201ENST00000473882 321 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC079841.1-201ENST00000481228 950 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC008868.1-201ENST00000509786 737 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SCARNA18.2-201ENST00000516882 84 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SAA3P-201ENST00000533267 365 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AP000873.5-201ENST00000533906 236 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 MIR4800-201ENST00000537353 80 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 UBE2FP2-201ENST00000566646 462 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC079880.2-201ENST00000603790 1213 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AL031777.2-201ENST00000611953 196 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC090970.3-201ENST00000612566 866 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 U4.5-201ENST00000617137 123 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SNORA43.5-201ENST00000631270 138 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 FP325313.1-201ENST00000638228 703 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AP003119.3-201ENST00000566747 4192 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC009220.2-201ENST00000489759 1751 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 OR7E25P-201ENST00000344844 931 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 Y_RNA.359-201ENST00000365498 102 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC234772.1-201ENST00000377927 937 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 FAUP2-201ENST00000394301 401 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 FGF7P8-201ENST00000402994 292 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 PGBD4P8-201ENST00000412993 562 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC096632.2-201ENST00000438139 1239 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC068135.1-201ENST00000446164 246 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC005517.1-201ENST00000452091 489 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 MYL6P4-201ENST00000477911 453 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC091965.2-201ENST00000512324 613 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 BTG1P1-201ENST00000540396 508 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AC138207.8-204ENST00000579588 527 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 SAMMSON-209ENST00000641222 1100 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 CCDC150P1-201ENST00000537123 2215 ntBASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PDZRN3Q9UPQ7 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
PDZRN3Q9UPQ7 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
PDZRN3Q9UPQ7 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 API5P1-201ENST00000424316 1510 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms