Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 RN7SKP273-201ENST00000411392 314 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 LDHBP2-201ENST00000456969 1005 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AL049872.1-201ENST00000556323 322 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 DPPA3P2-202ENST00000557188 1219 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AL683813.2-201ENST00000605245 502 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AC005042.1-201ENST00000393397 800 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 SPTLC1P2-201ENST00000407089 121 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AL450996.1-201ENST00000445574 1202 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AL035090.1-201ENST00000454835 332 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 OR2AO1P-201ENST00000476497 403 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 RPL17P2-201ENST00000491913 451 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AL163952.1-202ENST00000569625 600 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
SCN11AQ9UI33 AC137056.2-201ENST00000624055 1958 ntBASIC7.35□□□□□ -1.23
SCN11AQ9UI33 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AC108075.1-201ENST00000424692 529 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AC073410.1-201ENST00000435125 589 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 H2AFZP6-201ENST00000444403 394 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 RPS4XP1-201ENST00000482189 787 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 DUTP1-201ENST00000493631 470 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 NMNAT1P5-201ENST00000559657 841 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AC118658.2-201ENST00000618697 459 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 AC008115.4-201ENST00000619780 775 ntBASIC7.34□□□□□ -1.23
SCN11AQ9UI33 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN11AQ9UI33 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.34□□□□□ -1.24
SCN11AQ9UI33 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SCN11AQ9UI33 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 RNU1-77P-201ENST00000390868 162 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 FABP12P1-201ENST00000401911 322 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 OR52B5P-201ENST00000435337 951 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 LDHAP2-201ENST00000437325 985 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC074255.1-201ENST00000511259 501 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC126177.5-201ENST00000549599 178 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC044860.2-201ENST00000561005 179 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC132068.1-201ENST00000623805 459 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 OR52B5P-202ENST00000641118 1110 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms