Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL512624.1-201ENST00000613638 469 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 WDR95P-201ENST00000425638 1542 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 AC106872.5-201ENST00000508856 1416 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 MFSD8-219ENST00000641228 2559 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 RPL31P15-201ENST00000449770 338 ntBASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC022215.1-201ENST00000481770 362 ntBASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 RN7SKP67-201ENST00000515905 235 ntBASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC027308.1-201ENST00000517993 110 ntBASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC063977.5-201ENST00000601044 974 ntBASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 AL158152.1-201ENST00000602652 1435 ntBASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPC1L1Q9UHC9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 NIFKP3-201ENST00000417799 865 ntBASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 VN1R21P-201ENST00000426703 765 ntBASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 H3F3BP1-201ENST00000440551 403 ntBASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 MRPS16P1-201ENST00000523462 412 ntBASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 AL352984.2-201ENST00000611153 546 ntBASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 RNA5SP440-201ENST00000612665 119 ntBASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
NPC1L1Q9UHC9 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 RARSP1-201ENST00000542842 1418 ntBASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 AC034229.2-201ENST00000566945 2508 ntBASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 FUNDC2P3-201ENST00000334716 533 ntBASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 EEF1B2P8-201ENST00000414101 671 ntBASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 CRIP1P1-201ENST00000427567 185 ntBASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 RN7SL273P-201ENST00000481561 299 ntBASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 FAM27E4-201ENST00000605259 342 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms