Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.62□□□□□ -1.35
CCSER1Q9C0I3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.62□□□□□ -1.35
CCSER1Q9C0I3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCSER1Q9C0I3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCSER1Q9C0I3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CCSER1Q9C0I3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 KYNUP3-201ENST00000574386 1341 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 RN7SKP240-201ENST00000410583 375 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL354890.1-201ENST00000413730 346 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL590399.2-201ENST00000427536 309 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 LDHAP2-201ENST00000437325 985 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 VN1R110P-201ENST00000438988 971 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 ATP5LP2-201ENST00000440646 311 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 snoU13.29-201ENST00000459370 104 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL157777.1-201ENST00000468100 304 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AC093719.1-201ENST00000480427 441 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 SCARNA18.1-201ENST00000516330 83 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 RN7SKP238-201ENST00000516483 249 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 RNA5SP340-201ENST00000517132 107 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 SUMO2P19-201ENST00000518920 295 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AC007956.1-201ENST00000555623 542 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 GARSP1-201ENST00000570895 719 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL049840.6-201ENST00000604583 345 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AC024884.1-201ENST00000620583 399 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 CASC19-238ENST00000641523 1558 ntBASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCSER1Q9C0I3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 RN7SKP78-201ENST00000364711 318 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 RNU6-673P-201ENST00000365084 104 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 TUBB4BP6-201ENST00000437576 479 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 CST12P-201ENST00000457644 362 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC006539.1-201ENST00000481419 501 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 PDCL3P4-201ENST00000489621 720 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 RN7SL193P-201ENST00000491708 276 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC126615.2-201ENST00000553003 515 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 DPPA3P2-202ENST00000557188 1219 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 LINC00556-201ENST00000569603 412 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC079315.1-201ENST00000602952 623 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC108865.2-201ENST00000606881 432 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AL139099.4-201ENST00000614802 114 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 AF287957.1-201ENST00000607368 1595 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.6□□□□□ -1.35
CCSER1Q9C0I3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms