Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 BX510359.3-201ENST00000422168 306 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 BX323845.3-201ENST00000428215 527 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 USP24P1-201ENST00000433802 779 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 SUMO2P3-201ENST00000438311 288 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AC064862.4-201ENST00000442180 334 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 RN7SL352P-201ENST00000466002 277 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 RN7SL269P-201ENST00000467795 305 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 RNA5SP362-201ENST00000516048 118 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AC110056.1-201ENST00000525759 911 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AP003080.1-202ENST00000526526 915 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AL356801.1-201ENST00000559320 294 ntBASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 MIR375-201ENST00000362103 64 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC021876.1-201ENST00000425959 359 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AL390879.1-201ENST00000439143 386 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC023245.1-201ENST00000468501 517 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC083795.1-201ENST00000491760 320 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AL136038.1-201ENST00000497246 351 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 RN7SL284P-201ENST00000498823 275 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 SNORA70.20-201ENST00000516848 126 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 WBP1LP3-201ENST00000523033 208 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC007225.2-201ENST00000562529 256 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC004477.3-201ENST00000614061 590 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AL355974.3-201ENST00000617383 467 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AC069234.4-201ENST00000621276 412 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 AL049767.1-202ENST00000637826 242 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 OR8G3P-202ENST00000641572 1255 ntBASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
RPAP1Q9BWH6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 OFD1P17-201ENST00000437639 3018 ntBASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.21□□□□□ -1.26
RPAP1Q9BWH6 RNA5SP375-201ENST00000362975 119 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 RNA5SP514-201ENST00000363717 111 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC016739.1-201ENST00000405359 345 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AL121776.1-201ENST00000429337 372 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 CLUHP1-201ENST00000435012 1190 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 GAPDHP48-201ENST00000436626 961 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 RPSAP37-201ENST00000470913 821 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 IGKV2-19-201ENST00000518132 283 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 TPM3P3-201ENST00000521343 354 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 MIR6826-201ENST00000617808 98 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 CR788268.1-201ENST00000603931 1809 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms