Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
ABCA3Q99758 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
ABCA3Q99758 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.53□□□□□ -1.2
ABCA3Q99758 GSTA7P-201ENST00000438425 448 ntBASIC7.53□□□□□ -1.2
ABCA3Q99758 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.53□□□□□ -1.2
ABCA3Q99758 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.53□□□□□ -1.2
ABCA3Q99758 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.53□□□□□ -1.2
ABCA3Q99758 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.53□□□□□ -1.2
ABCA3Q99758 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.53□□□□□ -1.2
ABCA3Q99758 AC105105.5-201ENST00000622635 1294 ntBASIC7.53□□□□□ -1.2
ABCA3Q99758 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.53□□□□□ -1.2
ABCA3Q99758 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
ABCA3Q99758 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
ABCA3Q99758 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
ABCA3Q99758 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
ABCA3Q99758 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.53□□□□□ -1.2
ABCA3Q99758 CDY5P-201ENST00000411487 1580 ntBASIC7.53□□□□□ -1.2
ABCA3Q99758 CDY9P-201ENST00000451397 1580 ntBASIC7.53□□□□□ -1.2
ABCA3Q99758 AC005618.1-201ENST00000606901 3148 ntBASIC7.53□□□□□ -1.2
ABCA3Q99758 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
ABCA3Q99758 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
ABCA3Q99758 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
ABCA3Q99758 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.53□□□□□ -1.2
ABCA3Q99758 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
ABCA3Q99758 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
ABCA3Q99758 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
ABCA3Q99758 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.52□□□□□ -1.2
ABCA3Q99758 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.52□□□□□ -1.2
ABCA3Q99758 GYG1P1-201ENST00000460864 698 ntBASIC7.52□□□□□ -1.2
ABCA3Q99758 RN7SL738P-201ENST00000470264 297 ntBASIC7.52□□□□□ -1.2
ABCA3Q99758 AC008897.1-201ENST00000494006 347 ntBASIC7.52□□□□□ -1.2
ABCA3Q99758 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.52□□□□□ -1.2
ABCA3Q99758 SNRPCP2-201ENST00000504370 475 ntBASIC7.52□□□□□ -1.2
ABCA3Q99758 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.52□□□□□ -1.2
ABCA3Q99758 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.52□□□□□ -1.2
ABCA3Q99758 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.52□□□□□ -1.2
ABCA3Q99758 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.52□□□□□ -1.2
ABCA3Q99758 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.2
ABCA3Q99758 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.52□□□□□ -1.2
ABCA3Q99758 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.52□□□□□ -1.2
ABCA3Q99758 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.52□□□□□ -1.2
ABCA3Q99758 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
ABCA3Q99758 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.52□□□□□ -1.21
ABCA3Q99758 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 AL353763.1-201ENST00000624467 1628 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.52□□□□□ -1.21
ABCA3Q99758 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 AC092070.2-203ENST00000598377 3644 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 AL035419.1-201ENST00000397037 564 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 OR4K12P-201ENST00000406538 961 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 AC091390.1-201ENST00000433904 331 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 DUTP1-201ENST00000493631 470 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 AC074255.1-201ENST00000511259 501 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 AL133406.3-201ENST00000606817 541 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7.52□□□□□ -1.21
ABCA3Q99758 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.52□□□□□ -1.21
ABCA3Q99758 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.52□□□□□ -1.21
ABCA3Q99758 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
ABCA3Q99758 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 OR9K1P-202ENST00000641111 3217 ntBASIC7.52□□□□□ -1.21
ABCA3Q99758 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ABCA3Q99758 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
ABCA3Q99758 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ABCA3Q99758 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
ABCA3Q99758 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.51□□□□□ -1.21
ABCA3Q99758 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
ABCA3Q99758 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ABCA3Q99758 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.51□□□□□ -1.21
ABCA3Q99758 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
ABCA3Q99758 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ABCA3Q99758 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.51□□□□□ -1.21
ABCA3Q99758 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 AL772161.1-201ENST00000439130 476 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 AC090142.2-201ENST00000483263 416 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.51□□□□□ -1.21
ABCA3Q99758 CYP4F27P-201ENST00000514557 494 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.51□□□□□ -1.21
ABCA3Q99758 AL049779.3-201ENST00000557141 606 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 DPPA3P2-202ENST00000557188 1219 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.51□□□□□ -1.21
ABCA3Q99758 AC011497.2-201ENST00000600255 639 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.51□□□□□ -1.21
ABCA3Q99758 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.51□□□□□ -1.21
ABCA3Q99758 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
ABCA3Q99758 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
ABCA3Q99758 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.51□□□□□ -1.21
ABCA3Q99758 AC011493.1-201ENST00000596753 1632 ntBASIC7.5□□□□□ -1.21
ABCA3Q99758 AC008124.1-201ENST00000609803 9730 ntBASIC7.5□□□□□ -1.21
ABCA3Q99758 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
ABCA3Q99758 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ABCA3Q99758 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.5□□□□□ -1.21
ABCA3Q99758 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms