Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC135721.2-201ENST00000464237 300 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC004801.2-201ENST00000468202 779 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 IGHVII-30-1-201ENST00000522218 301 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 OR5D2P-201ENST00000524390 911 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC079363.1-201ENST00000551366 1125 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC233290.2-201ENST00000552852 390 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 SIGLEC31P-201ENST00000594237 551 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 RPL12P25-202ENST00000598100 674 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC139792.3-201ENST00000623525 224 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 AC005618.4-201ENST00000625053 554 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHOX2BQ99453 DHRS9-206ENST00000436483 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHOX2BQ99453 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHOX2BQ99453 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHOX2BQ99453 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 BCL9P1-201ENST00000506012 2561 ntBASIC8.37□□□□□ -1.07
PHOX2BQ99453 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHOX2BQ99453 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHOX2BQ99453 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC8.37□□□□□ -1.07
PHOX2BQ99453 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHOX2BQ99453 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AL139811.2-201ENST00000373465 1630 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC009053.1-202ENST00000563377 2051 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC139426.3-201ENST00000605648 2059 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 OR4A15-201ENST00000314706 1035 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 Y_RNA.25-201ENST00000362528 102 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 CUBN-201ENST00000377823 705 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 RN7SKP110-201ENST00000410146 285 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 PPIAP23-201ENST00000420099 497 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 GAPDHP51-201ENST00000426454 1000 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 RPL21P88-201ENST00000436649 436 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 YWHAQP9-201ENST00000445891 512 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 RPL31P44-201ENST00000447680 377 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 RPL23AP20-201ENST00000447965 421 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 SNX18P4-201ENST00000456554 838 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 SLC25A15P2-201ENST00000457292 338 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 HNRNPA1P20-201ENST00000484852 955 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 RPL39P36-201ENST00000490784 156 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC091144.2-201ENST00000521717 433 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AP002802.1-201ENST00000526154 342 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 OR4A12P-201ENST00000530847 918 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 RPL21P5-201ENST00000554662 472 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 FAM106CP-201ENST00000582212 507 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC069304.2-201ENST00000605154 435 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC093388.1-201ENST00000609166 430 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC006238.1-201ENST00000609787 534 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 MIR7162-201ENST00000611134 69 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC097641.3-201ENST00000613523 464 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 TSHZ2-205ENST00000626626 670 ntBASIC8.36□□□□□ -1.07
PHOX2BQ99453 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
PHOX2BQ99453 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHOX2BQ99453 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms