Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 YWHABP1-201ENST00000445359 727 ntBASIC9.48□□□□□ -0.89
IFT140Q96RY7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.48□□□□□ -0.89
IFT140Q96RY7 TPM3P3-201ENST00000521343 354 ntBASIC9.48□□□□□ -0.89
IFT140Q96RY7 OR4H6P-201ENST00000563771 921 ntBASIC9.48□□□□□ -0.89
IFT140Q96RY7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
IFT140Q96RY7 AC025574.2-201ENST00000615621 514 ntBASIC9.48□□□□□ -0.89
IFT140Q96RY7 AC087385.3-201ENST00000620477 187 ntBASIC9.48□□□□□ -0.89
IFT140Q96RY7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
IFT140Q96RY7 MAPK10-350ENST00000641777 965 ntBASIC9.48□□□□□ -0.89
IFT140Q96RY7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.48□□□□□ -0.89
IFT140Q96RY7 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
IFT140Q96RY7 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 CASC19-281ENST00000642118 1554 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 BZW1P1-201ENST00000454901 1240 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 RPL5P22-201ENST00000480199 884 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC015864.1-201ENST00000496512 544 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 BNIP3P1-201ENST00000547295 580 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 MIR3934-201ENST00000579806 107 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC069307.1-201ENST00000602820 447 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
IFT140Q96RY7 AL590139.1-201ENST00000416267 400 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 FTH1P10-202ENST00000430907 550 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 RN7SL352P-201ENST00000466002 277 ntBASIC9.47□□□□□ -0.89
IFT140Q96RY7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC9.47□□□□□ -0.89
IFT140Q96RY7 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
IFT140Q96RY7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
IFT140Q96RY7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
IFT140Q96RY7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
IFT140Q96RY7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
IFT140Q96RY7 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
IFT140Q96RY7 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
IFT140Q96RY7 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
IFT140Q96RY7 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
IFT140Q96RY7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 AC068138.1-201ENST00000412635 217 ntBASIC9.46□□□□□ -0.9
IFT140Q96RY7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC9.46□□□□□ -0.9
IFT140Q96RY7 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.46□□□□□ -0.9
IFT140Q96RY7 AC024589.2-201ENST00000605642 1294 ntBASIC9.46□□□□□ -0.9
IFT140Q96RY7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
IFT140Q96RY7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.46□□□□□ -0.9
IFT140Q96RY7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
IFT140Q96RY7 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
IFT140Q96RY7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
IFT140Q96RY7 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC9.45□□□□□ -0.9
IFT140Q96RY7 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 AP003119.3-201ENST00000566747 4192 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
IFT140Q96RY7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 AOX3P-204ENST00000491025 2107 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 EPS15P1-202ENST00000459691 2071 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 AC110597.1-201ENST00000562669 3176 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 AC093162.1-201ENST00000419682 124 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 AC092106.1-201ENST00000444291 373 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 RNU6-941P-201ENST00000516346 108 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
IFT140Q96RY7 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.45□□□□□ -0.9
IFT140Q96RY7 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
IFT140Q96RY7 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC9.45□□□□□ -0.9
IFT140Q96RY7 AC110716.2-201ENST00000563865 3945 ntBASIC9.45□□□□□ -0.9
IFT140Q96RY7 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms