Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 AP003486.1-201ENST00000525716 3994 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AC092692.1-201ENST00000623625 2595 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 FUNDC2P3-201ENST00000334716 533 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 RNU1-49P-201ENST00000363468 159 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 RNU6-609P-201ENST00000365459 107 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AL354692.1-201ENST00000423044 315 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AC002069.1-201ENST00000429649 1159 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AL513321.1-201ENST00000441175 761 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 RNF2P1-201ENST00000442955 1010 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 GAPDHP23-201ENST00000444823 993 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC105918.1-201ENST00000474399 838 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.89□□□□□ -1.31
HPS3Q969F9 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC093763.2-201ENST00000505334 1223 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 ZNF519P4-201ENST00000514008 125 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 RNA5SP400-201ENST00000517155 111 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC024405.1-201ENST00000532521 1042 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC107958.1-201ENST00000556576 290 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC018558.5-201ENST00000565840 952 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AP003117.1-201ENST00000602771 554 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AC005776.1-201ENST00000603164 290 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 AC016957.2-201ENST00000616998 848 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HPS3Q969F9 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 AC003992.1-201ENST00000635364 557 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 MTND4P9-201ENST00000507819 1346 ntBASIC6.89□□□□□ -1.31
HPS3Q969F9 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.89□□□□□ -1.31
HPS3Q969F9 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS3Q969F9 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HPS3Q969F9 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.88□□□□□ -1.31
HPS3Q969F9 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 LINC01613-201ENST00000561476 2780 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HPS3Q969F9 AC119674.1-202ENST00000641333 1860 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC093909.5-201ENST00000621839 1799 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.88□□□□□ -1.31
HPS3Q969F9 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HPS3Q969F9 LCN1P2-201ENST00000372030 223 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 GCNT6-201ENST00000379591 934 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 RPS17P17-201ENST00000419392 409 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 RPSAP32-201ENST00000432681 526 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC006326.1-201ENST00000445465 787 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC112187.1-201ENST00000455837 479 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.88□□□□□ -1.31
HPS3Q969F9 EIF2S2P5-201ENST00000457635 968 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 RN7SL168P-201ENST00000463821 279 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 RN7SL326P-201ENST00000477493 296 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC092902.1-201ENST00000486999 259 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC015864.1-201ENST00000496512 544 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 MTATP6P9-201ENST00000515039 680 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.88□□□□□ -1.31
HPS3Q969F9 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.88□□□□□ -1.31
HPS3Q969F9 VTA1P2-201ENST00000520205 911 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 CYCSP25-201ENST00000525280 316 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.88□□□□□ -1.31
HPS3Q969F9 AC008147.3-201ENST00000548666 354 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.88□□□□□ -1.31
HPS3Q969F9 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms