Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC112187.2-201ENST00000604345 283 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AL035413.2-201ENST00000604801 525 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 TAS2R6P-201ENST00000605022 826 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AL136295.6-201ENST00000610486 658 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AL132765.2-201ENST00000610812 351 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AC012557.3-201ENST00000626439 255 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.22□□□□□ -1.09
HLA-CQ95604 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 MT-RNR2-201ENST00000387347 1559 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-CQ95604 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 AL022323.2-201ENST00000623239 3000 ntBASIC8.21□□□□□ -1.09
HLA-CQ95604 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.21□□□□□ -1.09
HLA-CQ95604 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC8.21□□□□□ -1.09
HLA-CQ95604 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
HLA-CQ95604 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.09
HLA-CQ95604 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 AL137918.1-201ENST00000624542 1922 ntBASIC8.21□□□□□ -1.09
HLA-CQ95604 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.21□□□□□ -1.09
HLA-CQ95604 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.21□□□□□ -1.09
HLA-CQ95604 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.21□□□□□ -1.09
HLA-CQ95604 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-CQ95604 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-CQ95604 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-CQ95604 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
HLA-CQ95604 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-CQ95604 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-CQ95604 TRIM51EP-201ENST00000524374 1516 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-CQ95604 Y_RNA.166-201ENST00000363730 102 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 RNU6-767P-201ENST00000384132 107 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC113608.1-201ENST00000398740 305 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC025750.1-201ENST00000399891 379 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AL049693.1-201ENST00000402760 611 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 RPS3AP3-201ENST00000411933 242 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC109780.2-201ENST00000413467 845 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC004690.1-201ENST00000418216 328 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-CQ95604 GAPDHP73-201ENST00000423411 1007 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 HMGB1P45-201ENST00000435986 653 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-CQ95604 GTF2F2P2-201ENST00000445825 721 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.21□□□□□ -1.1
HLA-CQ95604 MED28P8-201ENST00000454831 521 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC091544.1-201ENST00000484702 348 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 RN7SL635P-201ENST00000492123 296 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AL117692.1-201ENST00000494283 713 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC008868.1-201ENST00000509786 737 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-CQ95604 MTCYBP43-201ENST00000513621 740 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC100823.2-201ENST00000518337 699 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AP005902.2-201ENST00000518393 307 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC022878.1-201ENST00000530684 149 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-CQ95604 OR7E161P-201ENST00000533722 967 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-CQ95604 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-CQ95604 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.21□□□□□ -1.1
HLA-CQ95604 MIR4310-201ENST00000582950 57 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 KPNA2P3-201ENST00000584190 848 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.21□□□□□ -1.1
HLA-CQ95604 VN1R80P-201ENST00000597126 338 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-CQ95604 AC087283.1-201ENST00000604029 1074 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC124312.5-201ENST00000604451 268 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.21□□□□□ -1.1
HLA-CQ95604 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC005332.6-201ENST00000613178 446 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 AC006504.8-201ENST00000621046 635 ntBASIC8.21□□□□□ -1.1
HLA-CQ95604 YWHAEP7-203ENST00000622054 312 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms