Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 BET1P1-201ENST00000482276 359 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC023818.1-201ENST00000498379 384 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC096754.1-201ENST00000508904 818 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC067904.2-201ENST00000517322 1283 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 IGKV2D-38-201ENST00000518423 240 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC087752.2-201ENST00000521219 281 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC092375.1-201ENST00000550410 637 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 MIR4312-201ENST00000579909 76 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 QTRT1P1-201ENST00000604344 1078 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC073387.2-201ENST00000604797 784 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 PTCHD3P1-201ENST00000612350 537 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC011939.3-201ENST00000613686 466 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC005858.3-201ENST00000624756 589 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 AC017037.3-201ENST00000625016 472 ntBASIC5.9□□□□□ -1.46
CPEB3Q8NE35 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CPEB3Q8NE35 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 AL512353.3-201ENST00000417517 1326 ntBASIC5.9□□□□□ -1.47
CPEB3Q8NE35 NEK2P4-201ENST00000425793 1329 ntBASIC5.9□□□□□ -1.47
CPEB3Q8NE35 AL512310.3-201ENST00000547023 1335 ntBASIC5.9□□□□□ -1.47
CPEB3Q8NE35 AC119674.1-204ENST00000641348 1343 ntBASIC5.9□□□□□ -1.47
CPEB3Q8NE35 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 CUL4AP1-201ENST00000514750 1863 ntBASIC5.9□□□□□ -1.47
CPEB3Q8NE35 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CPEB3Q8NE35 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 OLMALINC-203ENST00000641087 3779 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC008549.2-201ENST00000333482 706 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 RNA5SP514-201ENST00000363717 111 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 RNA5SP474-201ENST00000391234 90 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AL079341.1-201ENST00000404701 1207 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 RNU4-64P-201ENST00000410795 131 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 Z68694.1-201ENST00000413929 841 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SETP9-201ENST00000423837 832 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 VN1R21P-201ENST00000426703 765 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC093422.3-201ENST00000428506 305 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC147055.3-201ENST00000510547 851 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 RNA5SP96-201ENST00000516041 107 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SCARNA11.1-201ENST00000516918 132 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AP003080.1-202ENST00000526526 915 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms