Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 OR4A43P-201ENST00000532938 908 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC002519.2-203ENST00000567043 837 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AC096708.4-201ENST00000620563 552 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AL137067.2-201ENST00000621202 131 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 AP001052.1-201ENST00000626421 99 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC28Q86X40 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.31□□□□□ -1.56
LRRC28Q86X40 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC28Q86X40 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AL034546.1-201ENST00000623740 3693 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC006600.2-201ENST00000624834 2506 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 SNORA43.1-201ENST00000364863 140 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 CXADRP1-201ENST00000398098 1095 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 RN7SKP166-201ENST00000410812 305 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC092865.3-201ENST00000425390 1026 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 BX119904.3-201ENST00000428194 957 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC112492.2-201ENST00000432774 1030 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 MTND2P40-201ENST00000436718 841 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 HMGB1P7-201ENST00000450921 612 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 RN7SL254P-201ENST00000460609 284 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC104339.1-201ENST00000465478 348 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC079080.1-201ENST00000479841 822 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC105420.1-201ENST00000504389 582 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC095052.1-201ENST00000509955 863 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 SNX18P25-201ENST00000510539 758 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 HSD3BP3-201ENST00000514706 994 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 RNA5SP206-201ENST00000516703 121 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC036111.2-201ENST00000533247 901 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC084121.1-201ENST00000533882 835 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AL845552.1-201ENST00000556820 323 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC026826.3-201ENST00000561747 158 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AL163952.1-202ENST00000569625 600 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC002069.2-201ENST00000603580 883 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 CXADRP3-202ENST00000617265 1100 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC073593.1-201ENST00000624500 411 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 OR7A1P-202ENST00000641542 1158 ntBASIC5.3□□□□□ -1.56
LRRC28Q86X40 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRC28Q86X40 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC28Q86X40 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC28Q86X40 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC28Q86X40 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC28Q86X40 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.29□□□□□ -1.56
LRRC28Q86X40 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC28Q86X40 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LRRC28Q86X40 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LRRC28Q86X40 AP001284.1-201ENST00000528393 2118 ntBASIC5.29□□□□□ -1.56
LRRC28Q86X40 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LRRC28Q86X40 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC28Q86X40 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC28Q86X40 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRRC28Q86X40 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRRC28Q86X40 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRRC28Q86X40 OOSP1-201ENST00000398992 1270 ntBASIC5.29□□□□□ -1.56
LRRC28Q86X40 AL035422.1-201ENST00000414193 397 ntBASIC5.29□□□□□ -1.56
LRRC28Q86X40 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms