Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 SPATA31C1-201ENST00000420021 3895 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AL121886.1-201ENST00000358609 435 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 RN7SKP95-201ENST00000362860 303 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 RNA5SP335-201ENST00000363817 110 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AL031320.1-201ENST00000604177 357 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC112255.1-201ENST00000624070 2493 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 ATM-215ENST00000530958 5718 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 FAM3C2-201ENST00000312214 681 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 CHIAP3-201ENST00000423668 1133 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC096775.1-201ENST00000437724 448 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 Z92846.1-201ENST00000456203 268 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AP005403.1-201ENST00000579720 229 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC003973.3-201ENST00000624863 2822 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 AL389915.1-201ENST00000422463 466 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 GTF2IP2-201ENST00000424290 697 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC016712.1-201ENST00000431088 378 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC068587.1-201ENST00000483613 781 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 RN7SKP21-201ENST00000516503 220 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 RAB9BP1-201ENST00000519581 626 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 CYCSP29-201ENST00000533731 318 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 AL627230.1-201ENST00000613077 211 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AL591926.8-201ENST00000616876 211 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC006511.3-201ENST00000624929 1783 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 RN7SKP100-201ENST00000411258 284 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 CYP4F29P-201ENST00000420685 446 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC122718.1-201ENST00000439448 744 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 snoU13.20-201ENST00000459180 104 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 FAM133DP-201ENST00000464802 691 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 NDUFA5P9-201ENST00000472609 340 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC073869.10-201ENST00000642016 354 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 AC005224.3-201ENST00000584683 2140 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS13CQ709C8 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS13CQ709C8 ZNF658B-201ENST00000602828 3408 ntBASIC4.55□□□□□ -1.68
VPS13CQ709C8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms