Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AL157831.2-201ENST00000564681 3095 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RNA5SP335-201ENST00000363817 110 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RPS15AP30-201ENST00000420976 390 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AL360081.1-201ENST00000428299 555 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AL450023.1-201ENST00000450868 751 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AL161747.1-201ENST00000480068 358 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RN7SL205P-201ENST00000490174 284 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 OR4A13P-201ENST00000529316 942 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC027229.1-201ENST00000583887 253 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RN7SL52P-201ENST00000584271 284 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC104687.2-201ENST00000604442 342 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RN7SL722P-201ENST00000617780 284 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RN7SL565P-201ENST00000618246 284 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC068538.1-201ENST00000376856 336 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 OR5M12P-201ENST00000423388 929 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC034236.1-201ENST00000469891 373 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC022215.1-201ENST00000481770 362 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC010329.1-201ENST00000593903 8328 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC011815.2-201ENST00000618230 2021 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 RPL23P2-201ENST00000320371 421 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 SNORA51.8-201ENST00000384234 132 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 OR2W4P-201ENST00000406496 926 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 RPS4XP5-201ENST00000419038 768 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC145423.1-201ENST00000605712 336 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC141002.1-201ENST00000607025 279 ntBASIC5.72□□□□□ -1.49
RIF1Q5UIP0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIF1Q5UIP0 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 RPL32P3-201ENST00000359025 275 ntBASIC5.71□□□□□ -1.49
RIF1Q5UIP0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 GTF2IP2-201ENST00000424290 697 ntBASIC5.71□□□□□ -1.49
RIF1Q5UIP0 RPL18P10-201ENST00000425606 538 ntBASIC5.71□□□□□ -1.49
RIF1Q5UIP0 HMGB3P24-201ENST00000433260 622 ntBASIC5.71□□□□□ -1.49
RIF1Q5UIP0 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.71□□□□□ -1.49
RIF1Q5UIP0 AL139156.3-201ENST00000454802 394 ntBASIC5.71□□□□□ -1.49
RIF1Q5UIP0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 NRBF2P4-201ENST00000520874 850 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms