Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 SNX18P3-202ENST00000565670 1750 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 RNA5SP333-201ENST00000363466 118 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 RNA5SP334-201ENST00000364825 118 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AC007562.1-201ENST00000421819 517 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 HMGB3P24-201ENST00000433260 622 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AC002504.1-201ENST00000438281 691 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AC023274.2-201ENST00000445264 521 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AC073909.1-201ENST00000447112 999 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AL136038.1-201ENST00000497246 351 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 NENFP3-201ENST00000503735 313 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AC008945.1-201ENST00000505144 499 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 RN7SL544P-201ENST00000617232 284 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AL445670.1-201ENST00000618889 801 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 RN7SL763P-201ENST00000620922 284 ntBASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 FABP5P2-201ENST00000439042 408 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 RPL23AP60-201ENST00000450011 454 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 RN7SL72P-201ENST00000460697 269 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 RN7SL629P-201ENST00000489622 285 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 DUTP7-201ENST00000507982 486 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC027308.1-201ENST00000517993 110 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AL589674.2-201ENST00000604304 337 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AP003789.1-201ENST00000617737 605 ntBASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM1Q2M3G4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 USP9YP3-201ENST00000434481 1766 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 RNA5SP211-201ENST00000365516 117 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 RN7SKP293-201ENST00000411389 296 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AL596448.1-201ENST00000415024 392 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 Z93019.1-201ENST00000416450 973 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 OR5W1P-201ENST00000423705 938 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC011742.2-201ENST00000443818 352 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 ACA64.4-201ENST00000459070 127 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 EIF3LP3-201ENST00000495197 822 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 SNORA43.3-201ENST00000517240 103 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AP000864.1-201ENST00000609424 650 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC018659.2-201ENST00000624690 715 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AC087565.3-203ENST00000641018 837 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 AL596275.2-208ENST00000641192 594 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms