Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFX7Q2KHR2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX7Q2KHR2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RFX7Q2KHR2 AL662795.2-201ENST00000624252 3706 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 SNRPEP6-201ENST00000407465 277 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 AC004129.2-201ENST00000457229 287 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 NENFP3-201ENST00000503735 313 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 snoU109.5-201ENST00000516231 132 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 AC007346.2-201ENST00000564816 892 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 MIR3176-201ENST00000582210 90 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 AC004477.3-201ENST00000614061 590 ntBASIC7.13□□□□□ -1.27
RFX7Q2KHR2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.13□□□□□ -1.27
RFX7Q2KHR2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC092724.1-201ENST00000624623 3397 ntBASIC7.12□□□□□ -1.27
RFX7Q2KHR2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 RN7SKP279-201ENST00000411383 298 ntBASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 H3F3BP1-201ENST00000440551 403 ntBASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 NPM1P42-201ENST00000560329 862 ntBASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 SNORD95-201ENST00000579879 68 ntBASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 AC145423.1-201ENST00000605712 336 ntBASIC7.12□□□□□ -1.27
RFX7Q2KHR2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 RN7SL787P-201ENST00000613000 284 ntBASIC7.12□□□□□ -1.27
RFX7Q2KHR2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX7Q2KHR2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 MIR323A-201ENST00000362199 86 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 RN7SKP293-201ENST00000411389 296 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 AC092651.1-201ENST00000426110 312 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 BX119321.1-201ENST00000428912 797 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 LYPLA1P1-201ENST00000434514 622 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 BX679664.2-201ENST00000439282 283 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 RPSAP39-201ENST00000467439 883 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 AC074386.1-201ENST00000476560 767 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 DPPA2P4-201ENST00000563717 878 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 AC009962.1-201ENST00000567327 3813 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 GARSP1-201ENST00000570895 719 ntBASIC7.11□□□□□ -1.27
RFX7Q2KHR2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX7Q2KHR2 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms