Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN1BQ07699 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN1BQ07699 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN1BQ07699 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SCN1BQ07699 U3.10-201ENST00000364459 214 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 RN7SKP191-201ENST00000364713 306 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 MIR433-201ENST00000384837 93 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 MIR138-2-201ENST00000384916 84 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 MIR27A-201ENST00000385073 78 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 YWHAZP4-201ENST00000392459 708 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 RPL5P19-201ENST00000404228 893 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 AL590635.1-201ENST00000406314 586 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 RN7SKP91-201ENST00000410852 288 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 RN7SKP205-201ENST00000410999 307 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN1BQ07699 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 AL731534.1-201ENST00000434711 269 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN1BQ07699 BMS1P11-201ENST00000442351 885 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 BMS1P9-201ENST00000457640 885 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.48□□□□□ -1.53
SCN1BQ07699 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN1BQ07699 PCNAP1-201ENST00000505363 709 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC111000.6-201ENST00000514471 709 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.48□□□□□ -1.53
SCN1BQ07699 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SCN1BQ07699 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.48□□□□□ -1.53
SCN1BQ07699 OR7E19P-202ENST00000589942 844 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.48□□□□□ -1.53
SCN1BQ07699 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 MIR7854-201ENST00000620068 65 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN1BQ07699 AC079776.5-201ENST00000641920 211 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN1BQ07699 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SCN1BQ07699 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SCN1BQ07699 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN1BQ07699 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AL353743.3-201ENST00000442109 1468 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SCN1BQ07699 RNA5SP140-201ENST00000364524 92 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 RN7SKP81-201ENST00000365603 331 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN1BQ07699 U3.52-201ENST00000384034 216 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 AL034403.1-201ENST00000399414 885 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AL358178.1-201ENST00000407698 397 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 EEF1B2P8-201ENST00000414101 671 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AL359092.1-201ENST00000417156 265 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 MTCO1P57-201ENST00000432182 261 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AL121578.2-201ENST00000448797 447 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AC009244.1-201ENST00000450566 258 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 HSPE1P22-201ENST00000456856 327 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 EIF2S2P4-201ENST00000461070 984 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 TRBV5-2-201ENST00000489095 273 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 RPL5P14-201ENST00000494197 878 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AC026782.2-201ENST00000510845 636 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 RN7SKP196-201ENST00000516267 345 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 RNA5SP75-201ENST00000516841 111 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 EIF4A2P5-201ENST00000529914 499 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.47□□□□□ -1.53
SCN1BQ07699 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN1BQ07699 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AC122134.1-201ENST00000565664 1104 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms