Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL133260.1-201ENST00000405720 405 ntBASIC5.89□□□□□ -1.47
RAE1P78406 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 MTCO2P1-201ENST00000424648 477 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.89□□□□□ -1.47
RAE1P78406 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RAE1P78406 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
RAE1P78406 POU5F1P5-201ENST00000445059 658 ntBASIC5.89□□□□□ -1.47
RAE1P78406 RPL7L1P3-201ENST00000455249 689 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AL355032.1-201ENST00000472981 438 ntBASIC5.89□□□□□ -1.47
RAE1P78406 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
RAE1P78406 AC114728.1-201ENST00000488289 483 ntBASIC5.89□□□□□ -1.47
RAE1P78406 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.89□□□□□ -1.47
RAE1P78406 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.89□□□□□ -1.47
RAE1P78406 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.89□□□□□ -1.47
RAE1P78406 RN7SKP248-201ENST00000516278 305 ntBASIC5.89□□□□□ -1.47
RAE1P78406 Y_RNA.710-201ENST00000516975 110 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AC022826.1-201ENST00000519383 805 ntBASIC5.89□□□□□ -1.47
RAE1P78406 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.89□□□□□ -1.47
RAE1P78406 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 AP001372.4-201ENST00000524889 472 ntBASIC5.89□□□□□ -1.47
RAE1P78406 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RAE1P78406 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.89□□□□□ -1.47
RAE1P78406 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.89□□□□□ -1.47
RAE1P78406 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.89□□□□□ -1.47
RAE1P78406 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.89□□□□□ -1.47
RAE1P78406 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 RN7SL66P-201ENST00000582099 264 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AL096803.3-201ENST00000609032 532 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AC063944.3-201ENST00000609969 533 ntBASIC5.89□□□□□ -1.47
RAE1P78406 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AC109809.1-201ENST00000619665 545 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AL122023.1-201ENST00000622847 530 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AC010608.3-201ENST00000625048 527 ntBASIC5.89□□□□□ -1.47
RAE1P78406 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 AL627171.1-201ENST00000618845 1308 ntBASIC5.89□□□□□ -1.47
RAE1P78406 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RAE1P78406 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AC073365.1-203ENST00000641055 1992 ntBASIC5.89□□□□□ -1.47
RAE1P78406 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
RAE1P78406 MTCO1P4-201ENST00000520516 1409 ntBASIC5.89□□□□□ -1.47
RAE1P78406 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AC018717.1-201ENST00000457712 1505 ntBASIC5.89□□□□□ -1.47
RAE1P78406 AC017002.4-201ENST00000604721 1525 ntBASIC5.89□□□□□ -1.47
RAE1P78406 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 AC078880.4-201ENST00000617627 1749 ntBASIC5.88□□□□□ -1.47
RAE1P78406 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RAE1P78406 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.88□□□□□ -1.47
RAE1P78406 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RAE1P78406 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RAE1P78406 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RAE1P78406 SNORA70.9-201ENST00000384370 135 ntBASIC5.88□□□□□ -1.47
RAE1P78406 MIR122-201ENST00000385044 85 ntBASIC5.88□□□□□ -1.47
RAE1P78406 RNU6-1000P-201ENST00000391066 106 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AL121835.1-201ENST00000404250 354 ntBASIC5.88□□□□□ -1.47
RAE1P78406 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.88□□□□□ -1.47
RAE1P78406 MTCO2P17-201ENST00000424336 677 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.88□□□□□ -1.47
RAE1P78406 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 AC016027.5-201ENST00000427227 210 ntBASIC5.88□□□□□ -1.47
RAE1P78406 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.88□□□□□ -1.47
RAE1P78406 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 H3F3BP1-201ENST00000440551 403 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC064862.5-201ENST00000440618 334 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RAE1P78406 AC234771.2-201ENST00000445718 597 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 HIGD1AP16-201ENST00000450986 258 ntBASIC5.88□□□□□ -1.47
RAE1P78406 MTND2P6-201ENST00000455337 1030 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 AL445687.2-201ENST00000458156 728 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.88□□□□□ -1.47
RAE1P78406 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.88□□□□□ -1.47
RAE1P78406 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.88□□□□□ -1.47
RAE1P78406 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.88□□□□□ -1.47
RAE1P78406 TRAV31-201ENST00000502780 342 ntBASIC5.88□□□□□ -1.47
RAE1P78406 NACAP5-201ENST00000509863 636 ntBASIC5.88□□□□□ -1.47
RAE1P78406 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 CYP4F27P-201ENST00000514557 494 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC138517.1-201ENST00000515724 568 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC113191.1-201ENST00000517759 403 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms