Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AL136131.3-201ENST00000607600 188 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 AL359091.2-201ENST00000609303 556 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 MIR6809-201ENST00000612189 116 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 QRSL1P1-201ENST00000400977 1540 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 SELENOWP1-201ENST00000322792 252 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 RPS4XP5-201ENST00000419038 768 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AL590399.2-201ENST00000427536 309 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC096775.1-201ENST00000437724 448 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 BMS1P10-201ENST00000443754 1120 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 RBMY2AP-201ENST00000445405 1157 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 RBMY2CP-201ENST00000448575 1157 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 RBMY2DP-202ENST00000448881 1157 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 RBMY2BP-202ENST00000451071 1156 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 RSU1P1-201ENST00000453416 441 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 GEMIN2P1-201ENST00000454246 752 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 snoU13.29-201ENST00000459370 104 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC093719.1-201ENST00000480427 441 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC092349.1-201ENST00000504903 310 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AL158068.1-201ENST00000506116 616 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 MIR2117-201ENST00000516780 80 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 RN7SKP35-201ENST00000517210 151 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC145423.1-201ENST00000605712 336 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC092266.1-201ENST00000610958 165 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC241377.1-201ENST00000619797 406 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AL136228.1-201ENST00000622221 319 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 CASC19-274ENST00000642018 970 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HIST1H3AP68431 KYNUP3-201ENST00000574386 1341 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
HIST1H3AP68431 PSG10P-201ENST00000501199 1500 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 AC090181.3-201ENST00000624777 1514 ntBASIC5.18□□□□□ -1.58
HIST1H3AP68431 PPBPP2-201ENST00000513150 1362 ntBASIC5.17□□□□□ -1.58
HIST1H3AP68431 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HIST1H3AP68431 GTF2IP4-201ENST00000453092 2054 ntBASIC5.17□□□□□ -1.58
HIST1H3AP68431 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HIST1H3AP68431 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HIST1H3AP68431 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HIST1H3AP68431 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.17□□□□□ -1.58
HIST1H3AP68431 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.17□□□□□ -1.58
HIST1H3AP68431 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.17□□□□□ -1.58
HIST1H3AP68431 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HIST1H3AP68431 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HIST1H3AP68431 AC016745.2-201ENST00000608834 3443 ntBASIC5.17□□□□□ -1.58
HIST1H3AP68431 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HIST1H3AP68431 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms