Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC021766.1-201ENST00000624404 741 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
RPL39P62891 MTCO1P28-201ENST00000574177 1528 ntBASIC4.04□□□□□ -1.76
RPL39P62891 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.03□□□□□ -1.76
RPL39P62891 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 AC068870.1-201ENST00000563737 2455 ntBASIC4.03□□□□□ -1.76
RPL39P62891 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 NCOA4P2-201ENST00000340589 1813 ntBASIC4.03□□□□□ -1.76
RPL39P62891 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RPL39P62891 AL121886.1-201ENST00000358609 435 ntBASIC4.03□□□□□ -1.76
RPL39P62891 RNU1-134P-201ENST00000362935 165 ntBASIC4.03□□□□□ -1.76
RPL39P62891 RNA5SP326-201ENST00000363209 110 ntBASIC4.03□□□□□ -1.76
RPL39P62891 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RPL39P62891 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.03□□□□□ -1.76
RPL39P62891 AL117344.1-201ENST00000407196 616 ntBASIC4.03□□□□□ -1.76
RPL39P62891 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.03□□□□□ -1.76
RPL39P62891 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.03□□□□□ -1.76
RPL39P62891 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.03□□□□□ -1.76
RPL39P62891 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.03□□□□□ -1.76
RPL39P62891 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.03□□□□□ -1.76
RPL39P62891 AL158214.1-201ENST00000444423 404 ntBASIC4.03□□□□□ -1.76
RPL39P62891 LINC02210-201ENST00000444561 288 ntBASIC4.03□□□□□ -1.76
RPL39P62891 AL590004.3-202ENST00000445883 451 ntBASIC4.03□□□□□ -1.76
RPL39P62891 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 AL034369.1-201ENST00000453808 477 ntBASIC4.03□□□□□ -1.76
RPL39P62891 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 RPS17P5-201ENST00000498293 408 ntBASIC4.03□□□□□ -1.76
RPL39P62891 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.03□□□□□ -1.76
RPL39P62891 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.03□□□□□ -1.76
RPL39P62891 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.03□□□□□ -1.76
RPL39P62891 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.03□□□□□ -1.76
RPL39P62891 OR4A17P-201ENST00000526032 904 ntBASIC4.03□□□□□ -1.76
RPL39P62891 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 AC005632.2-201ENST00000564271 828 ntBASIC4.03□□□□□ -1.76
RPL39P62891 AC091304.5-201ENST00000568969 158 ntBASIC4.03□□□□□ -1.76
RPL39P62891 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RPL39P62891 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RPL39P62891 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.03□□□□□ -1.76
RPL39P62891 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 AC090241.1-201ENST00000587732 621 ntBASIC4.03□□□□□ -1.76
RPL39P62891 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.03□□□□□ -1.76
RPL39P62891 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.03□□□□□ -1.76
RPL39P62891 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.03□□□□□ -1.76
RPL39P62891 SMIM12P1-201ENST00000603004 274 ntBASIC4.03□□□□□ -1.76
RPL39P62891 AC010632.3-201ENST00000611377 369 ntBASIC4.03□□□□□ -1.76
RPL39P62891 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 AC073488.6-201ENST00000632293 754 ntBASIC4.03□□□□□ -1.76
RPL39P62891 OR11H2-202ENST00000641517 1085 ntBASIC4.03□□□□□ -1.76
RPL39P62891 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPL39P62891 HSPD1P7-201ENST00000447985 1686 ntBASIC4.03□□□□□ -1.76
RPL39P62891 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RPL39P62891 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.03□□□□□ -1.76
RPL39P62891 OR9K1P-202ENST00000641111 3217 ntBASIC4.02□□□□□ -1.77
RPL39P62891 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 AC018809.2-201ENST00000602436 3823 ntBASIC4.02□□□□□ -1.77
RPL39P62891 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 AC092681.1-201ENST00000297369 291 ntBASIC4.02□□□□□ -1.77
RPL39P62891 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RPL39P62891 HYALP1-201ENST00000417674 1279 ntBASIC4.02□□□□□ -1.77
RPL39P62891 NME1P1-201ENST00000420914 382 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms