Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CLDN6P56747 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN6P56747 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN6P56747 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CLDN6P56747 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN6P56747 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 FAM32BP-201ENST00000344033 333 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLDN6P56747 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN6P56747 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.79□□□□□ -1.48
CLDN6P56747 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN6P56747 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 TRIM60P16-201ENST00000444048 694 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 AC016027.4-201ENST00000450866 277 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN6P56747 AC093166.4-201ENST00000457867 318 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 AC092865.4-201ENST00000477936 615 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 RN7SL184P-201ENST00000488308 297 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.79□□□□□ -1.48
CLDN6P56747 AC138866.2-201ENST00000508650 584 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN6P56747 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 KCTD9P4-201ENST00000526766 1166 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN6P56747 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.79□□□□□ -1.48
CLDN6P56747 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.79□□□□□ -1.48
CLDN6P56747 MIR4700-201ENST00000578311 74 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 AC011497.2-201ENST00000600255 639 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 AC091193.1-201ENST00000604640 448 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 AC118658.2-201ENST00000618697 459 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 AL137067.2-201ENST00000621202 131 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 AC021766.1-201ENST00000624404 741 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.79□□□□□ -1.48
CLDN6P56747 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CLDN6P56747 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.79□□□□□ -1.48
CLDN6P56747 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN6P56747 PARP4P2-201ENST00000446672 3326 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 GNL2P1-201ENST00000451274 2190 ntBASIC5.79□□□□□ -1.48
CLDN6P56747 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CLDN6P56747 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 MAPK10-287ENST00000641217 3037 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLDN6P56747 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN6P56747 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN6P56747 RNA5SP478-201ENST00000364657 115 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN6P56747 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.78□□□□□ -1.48
CLDN6P56747 RPL34P3-201ENST00000421454 338 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 CFL1P1-202ENST00000432948 411 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN6P56747 AL627308.1-201ENST00000435693 821 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN6P56747 RPS23P6-201ENST00000466136 431 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AL133445.1-201ENST00000467051 452 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AC092824.1-201ENST00000483524 576 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 MTND5P12-201ENST00000502851 1449 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 NDUFA5P12-201ENST00000503796 343 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN6P56747 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN6P56747 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN6P56747 AL390726.5-202ENST00000564800 256 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN6P56747 MRPS21P9-201ENST00000571150 257 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AP001496.3-201ENST00000580230 913 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN6P56747 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.78□□□□□ -1.48
CLDN6P56747 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN6P56747 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 AC012254.5-201ENST00000623573 478 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AL691477.1-201ENST00000624398 162 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN6P56747 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 AC012254.3-201ENST00000591183 2117 ntBASIC5.78□□□□□ -1.48
CLDN6P56747 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms