Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL512593.1-201ENST00000444758 779 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC4P56524 AGGF1P3-201ENST00000493675 1213 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 RN7SL362P-201ENST00000494228 267 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 AC112484.3-201ENST00000505910 329 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC4P56524 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC4P56524 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC4P56524 HNRNPRP2-201ENST00000528421 743 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC4P56524 RN7SL230P-201ENST00000580835 303 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.41□□□□□ -1.38
HDAC4P56524 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 AC141002.1-201ENST00000607025 279 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 SNORA35B-201ENST00000607417 129 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 uc_338.31-201ENST00000615595 186 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC4P56524 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC4P56524 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC4P56524 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC4P56524 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.4□□□□□ -1.38
HDAC4P56524 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC4P56524 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC4P56524 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HDAC4P56524 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.4□□□□□ -1.38
HDAC4P56524 RNA5SP279-201ENST00000365513 117 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 MIR1282-201ENST00000408865 101 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.4□□□□□ -1.38
HDAC4P56524 AC015977.1-201ENST00000418887 292 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC4P56524 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC4P56524 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC4P56524 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC4P56524 AL139158.1-201ENST00000424719 340 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.4□□□□□ -1.38
HDAC4P56524 RPSAP65-201ENST00000429660 595 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 AC108479.1-201ENST00000431142 427 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 OR3D1P-201ENST00000438288 955 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 AC008945.1-201ENST00000505144 499 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 AC113367.2-201ENST00000505749 160 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC4P56524 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.4□□□□□ -1.38
HDAC4P56524 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC4P56524 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.4□□□□□ -1.38
HDAC4P56524 KCTD9P6-201ENST00000522306 950 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.4□□□□□ -1.38
HDAC4P56524 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC4P56524 NPIPB14P-203ENST00000532298 987 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC4P56524 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.4□□□□□ -1.38
HDAC4P56524 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.4□□□□□ -1.38
HDAC4P56524 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.4□□□□□ -1.38
HDAC4P56524 SMIM12P1-201ENST00000603004 274 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 AC091167.5-201ENST00000605689 894 ntBASIC6.4□□□□□ -1.38
HDAC4P56524 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC4P56524 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
HDAC4P56524 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.4□□□□□ -1.39
HDAC4P56524 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HDAC4P56524 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HDAC4P56524 AC022325.1-201ENST00000502748 2199 ntBASIC6.4□□□□□ -1.39
HDAC4P56524 AC140134.1-201ENST00000511830 3544 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 AC092070.2-203ENST00000598377 3644 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC4P56524 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC4P56524 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HDAC4P56524 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HDAC4P56524 RN7SKP86-201ENST00000410454 332 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC4P56524 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC4P56524 AL359885.1-201ENST00000415786 903 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC4P56524 FAM204CP-201ENST00000424489 642 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 MGAT2P2-201ENST00000427194 797 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC4P56524 PSMD10P2-201ENST00000432890 672 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC4P56524 RPL7L1P3-201ENST00000455249 689 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AC018638.3-201ENST00000461273 132 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 TRBV8-1-201ENST00000481590 279 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AC138409.2-202ENST00000507274 458 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 RNU6-943P-201ENST00000516960 98 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC4P56524 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms