Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXA3P55318 MFSD8-239ENST00000641590 2479 ntBASIC4.36□□□□□ -1.71
FOXA3P55318 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.36□□□□□ -1.71
FOXA3P55318 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXA3P55318 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXA3P55318 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXA3P55318 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXA3P55318 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.36□□□□□ -1.71
FOXA3P55318 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
FOXA3P55318 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXA3P55318 AC007342.5-201ENST00000571340 2142 ntBASIC4.36□□□□□ -1.71
FOXA3P55318 AC063923.1-201ENST00000478982 1619 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXA3P55318 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXA3P55318 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 AC092681.1-201ENST00000297369 291 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXA3P55318 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 OR10R3P-201ENST00000361688 942 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 RNA5SP429-201ENST00000363688 109 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
FOXA3P55318 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXA3P55318 AL139100.1-201ENST00000408001 498 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 RNF10P1-201ENST00000418589 369 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AC099677.3-201ENST00000427081 395 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AC112492.2-201ENST00000432774 1030 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXA3P55318 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 CR391992.1-201ENST00000438601 394 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AL359265.1-201ENST00000440296 795 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 LINC02210-201ENST00000444561 288 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC097359.1-201ENST00000447946 463 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 NPM1P19-201ENST00000450070 712 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 GAPDHP14-201ENST00000450472 937 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AC099670.1-201ENST00000455141 783 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 RN7SL72P-201ENST00000460697 269 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC096661.1-201ENST00000515870 822 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 RNA5SP206-201ENST00000516703 121 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC009852.2-201ENST00000567898 485 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXA3P55318 LINC00556-201ENST00000569603 412 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 AC006363.1-201ENST00000603806 463 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AC139792.1-201ENST00000607051 647 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AL139124.1-201ENST00000609123 421 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AC008833.1-201ENST00000611633 691 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 AL121985.3-201ENST00000620690 523 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 EIF3EP1-201ENST00000433978 1316 ntBASIC4.35□□□□□ -1.71
FOXA3P55318 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXA3P55318 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXA3P55318 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXA3P55318 AC006206.1-201ENST00000544842 3387 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXA3P55318 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXA3P55318 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 AC010894.1-201ENST00000313760 361 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 RNA5SP346-201ENST00000363541 121 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 SNORA7A-201ENST00000384765 139 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AL445213.1-201ENST00000412589 747 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AL096829.1-201ENST00000413677 457 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 DHFRP2-201ENST00000414224 547 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AL133482.1-201ENST00000415988 498 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms