Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH13P55290 RNA5SP110-201ENST00000362638 115 ntBASIC5.86□□□□□ -1.47
CDH13P55290 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CDH13P55290 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CDH13P55290 AL133260.1-201ENST00000405720 405 ntBASIC5.86□□□□□ -1.47
CDH13P55290 NACAP7-201ENST00000407371 609 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CDH13P55290 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH13P55290 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 H3F3AP5-201ENST00000475267 429 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 MRPL57P6-201ENST00000506570 309 ntBASIC5.86□□□□□ -1.47
CDH13P55290 HMGN1P16-201ENST00000508308 283 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AC093815.1-201ENST00000508637 280 ntBASIC5.86□□□□□ -1.47
CDH13P55290 SNX18P25-201ENST00000510539 758 ntBASIC5.86□□□□□ -1.47
CDH13P55290 ZNF519P4-201ENST00000514008 125 ntBASIC5.86□□□□□ -1.47
CDH13P55290 SETP21-201ENST00000514799 892 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AC113191.1-201ENST00000517759 403 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH13P55290 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH13P55290 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH13P55290 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH13P55290 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH13P55290 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH13P55290 AC004232.2-201ENST00000574245 821 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AP005136.2-201ENST00000583253 1049 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH13P55290 RFPL4AP6-201ENST00000616792 846 ntBASIC5.86□□□□□ -1.47
CDH13P55290 SNX18P12-201ENST00000624821 759 ntBASIC5.86□□□□□ -1.47
CDH13P55290 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 LINC01613-201ENST00000561476 2780 ntBASIC5.86□□□□□ -1.47
CDH13P55290 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
CDH13P55290 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 AL591135.1-201ENST00000401578 5914 ntBASIC5.86□□□□□ -1.47
CDH13P55290 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 AC239868.2-201ENST00000564237 4527 ntBASIC5.85□□□□□ -1.47
CDH13P55290 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDH13P55290 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 RNU6-819P-201ENST00000364116 107 ntBASIC5.85□□□□□ -1.47
CDH13P55290 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH13P55290 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 PSMA6P1-201ENST00000400275 741 ntBASIC5.85□□□□□ -1.47
CDH13P55290 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.85□□□□□ -1.47
CDH13P55290 MYL6P5-201ENST00000412707 459 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AC245096.1-201ENST00000413104 546 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH13P55290 RPL35AP31-201ENST00000418340 337 ntBASIC5.85□□□□□ -1.47
CDH13P55290 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 LINC00328-2P-201ENST00000436585 219 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AL512637.1-201ENST00000439523 1231 ntBASIC5.85□□□□□ -1.47
CDH13P55290 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDH13P55290 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH13P55290 AC016027.4-201ENST00000450866 277 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AC099670.1-201ENST00000455141 783 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH13P55290 RPS7P10-201ENST00000464254 603 ntBASIC5.85□□□□□ -1.47
CDH13P55290 RPL12P30-201ENST00000488389 499 ntBASIC5.85□□□□□ -1.47
CDH13P55290 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH13P55290 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
CDH13P55290 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH13P55290 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH13P55290 NPM1P21-201ENST00000513394 762 ntBASIC5.85□□□□□ -1.47
CDH13P55290 SNORA70.17-201ENST00000516449 133 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH13P55290 AC026616.1-201ENST00000523157 525 ntBASIC5.85□□□□□ -1.47
CDH13P55290 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH13P55290 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH13P55290 OR7M1P-201ENST00000608946 533 ntBASIC5.85□□□□□ -1.47
CDH13P55290 MIR6774-201ENST00000614651 70 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AC096861.1-201ENST00000616652 240 ntBASIC5.85□□□□□ -1.47
CDH13P55290 MIR6823-201ENST00000622118 61 ntBASIC5.85□□□□□ -1.47
CDH13P55290 AC007603.3-201ENST00000636915 979 ntBASIC5.85□□□□□ -1.47
CDH13P55290 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH13P55290 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms