Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC108103.1-201ENST00000511286 446 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH11P55287 AC087272.1-201ENST00000523624 533 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 OR5D2P-201ENST00000524390 911 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 TOMM20P1-201ENST00000534518 427 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH11P55287 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH11P55287 AC026826.3-201ENST00000561747 158 ntBASIC5.58□□□□□ -1.52
CDH11P55287 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 OR1E3-201ENST00000575608 948 ntBASIC5.58□□□□□ -1.52
CDH11P55287 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 AL499605.1-201ENST00000604628 403 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 AL354696.1-201ENST00000614652 497 ntBASIC5.58□□□□□ -1.52
CDH11P55287 MIR6778-201ENST00000617912 73 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 MAPK10-350ENST00000641777 965 ntBASIC5.58□□□□□ -1.52
CDH11P55287 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 CASC19-246ENST00000641625 1606 ntBASIC5.58□□□□□ -1.52
CDH11P55287 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 AL136984.1-201ENST00000607611 1893 ntBASIC5.58□□□□□ -1.52
CDH11P55287 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH11P55287 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 GTF2IP4-201ENST00000453092 2054 ntBASIC5.57□□□□□ -1.52
CDH11P55287 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDH11P55287 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 KYNUP3-201ENST00000574386 1341 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC022417.1-201ENST00000624768 1303 ntBASIC5.57□□□□□ -1.52
CDH11P55287 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDH11P55287 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDH11P55287 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 RNA5SP431-201ENST00000410312 120 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC019070.1-201ENST00000415008 1024 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 MTND2P12-201ENST00000417560 1252 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC108479.1-201ENST00000431142 427 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 CXCR2P1-202ENST00000443392 1074 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 MORF4-201ENST00000447135 971 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 RN7SL254P-201ENST00000460609 284 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AP002884.1-201ENST00000479691 655 ntBASIC5.57□□□□□ -1.52
CDH11P55287 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 RN7SKP5-201ENST00000517045 272 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 BCAS2P1-201ENST00000528022 632 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH11P55287 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH11P55287 AL845552.1-201ENST00000556820 323 ntBASIC5.57□□□□□ -1.52
CDH11P55287 NPM1P42-201ENST00000560329 862 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC005632.2-201ENST00000564271 828 ntBASIC5.57□□□□□ -1.52
CDH11P55287 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH11P55287 DYNLL1P1-201ENST00000595442 269 ntBASIC5.57□□□□□ -1.52
CDH11P55287 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH11P55287 AC125494.2-201ENST00000602431 657 ntBASIC5.57□□□□□ -1.52
CDH11P55287 SNORA35B-201ENST00000607417 129 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC093388.1-201ENST00000609166 430 ntBASIC5.57□□□□□ -1.52
CDH11P55287 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AC104820.1-201ENST00000624183 307 ntBASIC5.57□□□□□ -1.52
CDH11P55287 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH11P55287 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
CDH11P55287 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH11P55287 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 AL592429.1-201ENST00000403909 1473 ntBASIC5.57□□□□□ -1.52
CDH11P55287 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
CDH11P55287 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH11P55287 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 AC140479.2-201ENST00000421567 3130 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms