Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH4P55283 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH4P55283 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH4P55283 AC145423.1-201ENST00000605712 336 ntBASIC6.09□□□□□ -1.43
CDH4P55283 AL139099.4-201ENST00000614802 114 ntBASIC6.09□□□□□ -1.43
CDH4P55283 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.09□□□□□ -1.43
CDH4P55283 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH4P55283 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
CDH4P55283 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH4P55283 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDH4P55283 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.09□□□□□ -1.44
CDH4P55283 AL731532.1-201ENST00000623972 4236 ntBASIC6.09□□□□□ -1.44
CDH4P55283 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.09□□□□□ -1.44
CDH4P55283 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
CDH4P55283 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
CDH4P55283 PARP4P2-201ENST00000446672 3326 ntBASIC6.09□□□□□ -1.44
CDH4P55283 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.09□□□□□ -1.44
CDH4P55283 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 AL591135.1-201ENST00000401578 5914 ntBASIC6.08□□□□□ -1.44
CDH4P55283 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CDH4P55283 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 HSPD1P8-201ENST00000400121 1658 ntBASIC6.08□□□□□ -1.44
CDH4P55283 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH4P55283 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 RNU1-150P-201ENST00000362491 162 ntBASIC6.08□□□□□ -1.44
CDH4P55283 RN7SKP15-201ENST00000364742 309 ntBASIC6.08□□□□□ -1.44
CDH4P55283 SLC20A1P1-201ENST00000413906 956 ntBASIC6.08□□□□□ -1.44
CDH4P55283 VN1R3-201ENST00000418822 919 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AL663074.2-201ENST00000440621 479 ntBASIC6.08□□□□□ -1.44
CDH4P55283 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.08□□□□□ -1.44
CDH4P55283 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 AC144530.1-201ENST00000452862 555 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 PFN1P6-201ENST00000476786 399 ntBASIC6.08□□□□□ -1.44
CDH4P55283 RN7SL57P-201ENST00000493687 290 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AC006499.4-201ENST00000510947 694 ntBASIC6.08□□□□□ -1.44
CDH4P55283 GAPDHP71-201ENST00000511530 1003 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AC114781.3-201ENST00000512083 142 ntBASIC6.08□□□□□ -1.44
CDH4P55283 RN7SKP288-201ENST00000516227 268 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH4P55283 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH4P55283 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH4P55283 AC006530.1-201ENST00000555980 571 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.08□□□□□ -1.44
CDH4P55283 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 AC092121.1-201ENST00000569452 202 ntBASIC6.08□□□□□ -1.44
CDH4P55283 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 AL445670.1-201ENST00000618889 801 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 AP000550.3-201ENST00000637734 379 ntBASIC6.08□□□□□ -1.44
CDH4P55283 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH4P55283 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH4P55283 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH4P55283 AL049634.1-201ENST00000453770 1720 ntBASIC6.08□□□□□ -1.44
CDH4P55283 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CDH4P55283 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH4P55283 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
CDH4P55283 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDH4P55283 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CDH4P55283 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CDH4P55283 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.07□□□□□ -1.44
CDH4P55283 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CDH4P55283 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CDH4P55283 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CDH4P55283 LYPLA1P3-201ENST00000402650 695 ntBASIC6.07□□□□□ -1.44
CDH4P55283 AL451046.1-201ENST00000406097 534 ntBASIC6.07□□□□□ -1.44
CDH4P55283 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.07□□□□□ -1.44
CDH4P55283 PCBP2P1-201ENST00000437262 977 ntBASIC6.07□□□□□ -1.44
CDH4P55283 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH4P55283 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH4P55283 AL603882.1-201ENST00000463059 681 ntBASIC6.07□□□□□ -1.44
CDH4P55283 AC084754.1-201ENST00000463466 464 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms