Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 AL133243.2-201ENST00000610331 1621 ntBASIC6.55□□□□□ -1.36
VCPP55072 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
VCPP55072 RNA5SP346-201ENST00000363541 121 ntBASIC6.55□□□□□ -1.36
VCPP55072 SNORA70.9-201ENST00000384370 135 ntBASIC6.55□□□□□ -1.36
VCPP55072 MIR143-201ENST00000385300 106 ntBASIC6.55□□□□□ -1.36
VCPP55072 RNU11-6P-201ENST00000391127 133 ntBASIC6.55□□□□□ -1.36
VCPP55072 RN7SKP293-201ENST00000411389 296 ntBASIC6.55□□□□□ -1.36
VCPP55072 DPPA2P3-201ENST00000411853 655 ntBASIC6.55□□□□□ -1.36
VCPP55072 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.55□□□□□ -1.36
VCPP55072 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.55□□□□□ -1.36
VCPP55072 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.55□□□□□ -1.36
VCPP55072 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.55□□□□□ -1.36
VCPP55072 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 OR4D12P-201ENST00000509361 911 ntBASIC6.55□□□□□ -1.36
VCPP55072 RNU6-964P-201ENST00000516524 69 ntBASIC6.55□□□□□ -1.36
VCPP55072 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.55□□□□□ -1.36
VCPP55072 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.55□□□□□ -1.36
VCPP55072 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.55□□□□□ -1.36
VCPP55072 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.55□□□□□ -1.36
VCPP55072 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.55□□□□□ -1.36
VCPP55072 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 AC010547.6-201ENST00000571789 193 ntBASIC6.55□□□□□ -1.36
VCPP55072 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.55□□□□□ -1.36
VCPP55072 AC005332.4-201ENST00000592752 579 ntBASIC6.55□□□□□ -1.36
VCPP55072 AC068768.2-201ENST00000602352 343 ntBASIC6.55□□□□□ -1.36
VCPP55072 AL138960.1-201ENST00000613838 513 ntBASIC6.55□□□□□ -1.36
VCPP55072 AL512652.1-201ENST00000619006 500 ntBASIC6.55□□□□□ -1.36
VCPP55072 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.55□□□□□ -1.36
VCPP55072 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.55□□□□□ -1.36
VCPP55072 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
VCPP55072 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 AC093297.3-201ENST00000607056 2517 ntBASIC6.54□□□□□ -1.36
VCPP55072 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.54□□□□□ -1.36
VCPP55072 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VCPP55072 RNU1-19P-201ENST00000363306 165 ntBASIC6.54□□□□□ -1.36
VCPP55072 RN7SKP162-201ENST00000363605 345 ntBASIC6.54□□□□□ -1.36
VCPP55072 OR2W4P-201ENST00000406496 926 ntBASIC6.54□□□□□ -1.36
VCPP55072 OR2AT2P-201ENST00000413438 905 ntBASIC6.54□□□□□ -1.36
VCPP55072 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.54□□□□□ -1.36
VCPP55072 AC007562.1-201ENST00000421819 517 ntBASIC6.54□□□□□ -1.36
VCPP55072 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.54□□□□□ -1.36
VCPP55072 SOCS5P1-201ENST00000440415 949 ntBASIC6.54□□□□□ -1.36
VCPP55072 AC079922.1-201ENST00000443291 359 ntBASIC6.54□□□□□ -1.36
VCPP55072 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.54□□□□□ -1.36
VCPP55072 AC023274.2-201ENST00000445264 521 ntBASIC6.54□□□□□ -1.36
VCPP55072 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 MORF4L1P4-201ENST00000450245 976 ntBASIC6.54□□□□□ -1.36
VCPP55072 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 RPSAP37-201ENST00000470913 821 ntBASIC6.54□□□□□ -1.36
VCPP55072 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.54□□□□□ -1.36
VCPP55072 EIF4A2P5-201ENST00000529914 499 ntBASIC6.54□□□□□ -1.36
VCPP55072 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
VCPP55072 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VCPP55072 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.54□□□□□ -1.36
VCPP55072 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
VCPP55072 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
VCPP55072 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 AC005261.2-201ENST00000593427 4258 ntBASIC6.53□□□□□ -1.36
VCPP55072 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
VCPP55072 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms