Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
NUP98P52948 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.13□□□□□ -1.27
NUP98P52948 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
NUP98P52948 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NUP98P52948 RNU1-19P-201ENST00000363306 165 ntBASIC7.13□□□□□ -1.27
NUP98P52948 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 RNU1-77P-201ENST00000390868 162 ntBASIC7.13□□□□□ -1.27
NUP98P52948 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.13□□□□□ -1.27
NUP98P52948 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.13□□□□□ -1.27
NUP98P52948 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NUP98P52948 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.13□□□□□ -1.27
NUP98P52948 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.13□□□□□ -1.27
NUP98P52948 AL035090.1-201ENST00000454835 332 ntBASIC7.13□□□□□ -1.27
NUP98P52948 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.13□□□□□ -1.27
NUP98P52948 TRBV5-2-201ENST00000489095 273 ntBASIC7.13□□□□□ -1.27
NUP98P52948 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.13□□□□□ -1.27
NUP98P52948 CDC42P3-201ENST00000518493 633 ntBASIC7.13□□□□□ -1.27
NUP98P52948 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.13□□□□□ -1.27
NUP98P52948 MIR4700-201ENST00000578311 74 ntBASIC7.13□□□□□ -1.27
NUP98P52948 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.13□□□□□ -1.27
NUP98P52948 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.13□□□□□ -1.27
NUP98P52948 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
NUP98P52948 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.12□□□□□ -1.27
NUP98P52948 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.12□□□□□ -1.27
NUP98P52948 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 AC137056.2-201ENST00000624055 1958 ntBASIC7.12□□□□□ -1.27
NUP98P52948 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 MAPK10-338ENST00000641647 3362 ntBASIC7.12□□□□□ -1.27
NUP98P52948 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.12□□□□□ -1.27
NUP98P52948 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
NUP98P52948 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.12□□□□□ -1.27
NUP98P52948 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.12□□□□□ -1.27
NUP98P52948 OR52B5P-201ENST00000435337 951 ntBASIC7.12□□□□□ -1.27
NUP98P52948 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.12□□□□□ -1.27
NUP98P52948 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.12□□□□□ -1.27
NUP98P52948 IGLV3-24-201ENST00000517477 197 ntBASIC7.12□□□□□ -1.27
NUP98P52948 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.12□□□□□ -1.27
NUP98P52948 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.12□□□□□ -1.27
NUP98P52948 DPPA3P2-202ENST00000557188 1219 ntBASIC7.12□□□□□ -1.27
NUP98P52948 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.12□□□□□ -1.27
NUP98P52948 AC004836.1-201ENST00000623032 634 ntBASIC7.12□□□□□ -1.27
NUP98P52948 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.12□□□□□ -1.27
NUP98P52948 OR52B5P-202ENST00000641118 1110 ntBASIC7.12□□□□□ -1.27
NUP98P52948 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NUP98P52948 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NUP98P52948 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
NUP98P52948 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
NUP98P52948 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.11□□□□□ -1.27
NUP98P52948 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.11□□□□□ -1.27
NUP98P52948 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NUP98P52948 SNORD8-201ENST00000363915 110 ntBASIC7.11□□□□□ -1.27
NUP98P52948 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 RNA5SP339-201ENST00000390987 122 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AL121835.1-201ENST00000404250 354 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.11□□□□□ -1.27
NUP98P52948 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.11□□□□□ -1.27
NUP98P52948 RN7SL826P-201ENST00000479724 288 ntBASIC7.11□□□□□ -1.27
NUP98P52948 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.11□□□□□ -1.27
NUP98P52948 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.11□□□□□ -1.27
NUP98P52948 OR4A46P-201ENST00000527255 933 ntBASIC7.11□□□□□ -1.27
NUP98P52948 OR8G3P-201ENST00000533406 921 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC004825.1-201ENST00000555068 586 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC009831.5-201ENST00000624000 3189 ntBASIC7.11□□□□□ -1.27
NUP98P52948 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
NUP98P52948 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 SNORA70H-201ENST00000383910 135 ntBASIC7.11□□□□□ -1.27
NUP98P52948 SNORA70J-201ENST00000384182 135 ntBASIC7.11□□□□□ -1.27
NUP98P52948 RN7SKP151-201ENST00000410230 316 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC116036.1-201ENST00000412199 367 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC007161.1-204ENST00000423039 460 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC108075.1-201ENST00000424692 529 ntBASIC7.11□□□□□ -1.27
NUP98P52948 SUMO2P1-206ENST00000445436 284 ntBASIC7.11□□□□□ -1.27
NUP98P52948 NDUFA5P12-201ENST00000503796 343 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.11□□□□□ -1.27
NUP98P52948 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms