Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NEK3P51956 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NEK3P51956 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NEK3P51956 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NEK3P51956 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.58□□□□□ -1.36
NEK3P51956 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NEK3P51956 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 AC007382.1-201ENST00000624376 2618 ntBASIC6.58□□□□□ -1.36
NEK3P51956 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.58□□□□□ -1.36
NEK3P51956 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 RN7SKP171-201ENST00000364417 303 ntBASIC6.58□□□□□ -1.36
NEK3P51956 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.58□□□□□ -1.36
NEK3P51956 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 SNORA70.9-201ENST00000384370 135 ntBASIC6.58□□□□□ -1.36
NEK3P51956 RNU6-31P-201ENST00000384388 108 ntBASIC6.58□□□□□ -1.36
NEK3P51956 PSMA6P1-201ENST00000400275 741 ntBASIC6.58□□□□□ -1.36
NEK3P51956 RPL5P20-201ENST00000403848 896 ntBASIC6.58□□□□□ -1.36
NEK3P51956 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 TMA16P2-201ENST00000413187 601 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 MARK2P12-201ENST00000420129 585 ntBASIC6.58□□□□□ -1.36
NEK3P51956 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 Z68868.1-201ENST00000429048 544 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.58□□□□□ -1.36
NEK3P51956 AC093716.1-201ENST00000435923 377 ntBASIC6.58□□□□□ -1.36
NEK3P51956 ARMC4P1-201ENST00000438905 707 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 AC097359.1-201ENST00000447946 463 ntBASIC6.58□□□□□ -1.36
NEK3P51956 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 NPM1P17-201ENST00000479221 602 ntBASIC6.58□□□□□ -1.36
NEK3P51956 RPS27P20-201ENST00000492051 246 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 AC108120.2-201ENST00000512973 294 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC112206.4-201ENST00000515142 405 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 VTA1P2-201ENST00000520205 911 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 AC109635.6-201ENST00000525487 1113 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.58□□□□□ -1.36
NEK3P51956 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 AC093510.2-201ENST00000562820 896 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.58□□□□□ -1.36
NEK3P51956 BUB1P1-201ENST00000603541 607 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC004241.3-201ENST00000611728 517 ntBASIC6.58□□□□□ -1.36
NEK3P51956 MIR1264-201ENST00000616374 69 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC114546.4-201ENST00000624413 369 ntBASIC6.58□□□□□ -1.36
NEK3P51956 AC011815.2-201ENST00000618230 2021 ntBASIC6.58□□□□□ -1.36
NEK3P51956 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 LINC01613-201ENST00000561476 2780 ntBASIC6.58□□□□□ -1.36
NEK3P51956 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEK3P51956 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NEK3P51956 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 AC023245.2-201ENST00000530760 2978 ntBASIC6.57□□□□□ -1.36
NEK3P51956 RLIMP2-201ENST00000427891 1563 ntBASIC6.57□□□□□ -1.36
NEK3P51956 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.57□□□□□ -1.36
NEK3P51956 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NEK3P51956 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NEK3P51956 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NEK3P51956 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NEK3P51956 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 GAPDHP15-201ENST00000398586 975 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AL353692.2-201ENST00000407054 335 ntBASIC6.57□□□□□ -1.36
NEK3P51956 RPA2P2-201ENST00000419698 796 ntBASIC6.57□□□□□ -1.36
NEK3P51956 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NEK3P51956 AL139158.1-201ENST00000424719 340 ntBASIC6.57□□□□□ -1.36
NEK3P51956 MORF4L1P7-201ENST00000426038 703 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC083862.1-201ENST00000427378 1242 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC015983.1-201ENST00000441577 373 ntBASIC6.57□□□□□ -1.36
NEK3P51956 TIMM8BP2-201ENST00000445940 251 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.57□□□□□ -1.36
NEK3P51956 OR52E7P-201ENST00000452394 933 ntBASIC6.57□□□□□ -1.36
NEK3P51956 MTND2P6-201ENST00000455337 1030 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 AC107015.1-201ENST00000466902 747 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC108729.2-201ENST00000476543 840 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC020779.1-201ENST00000478757 796 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms