Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NEDD4P46934 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
NEDD4P46934 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
NEDD4P46934 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.88□□□□□ -1.31
NEDD4P46934 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.88□□□□□ -1.31
NEDD4P46934 ZNF969P-201ENST00000510345 2341 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.88□□□□□ -1.31
NEDD4P46934 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NEDD4P46934 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.88□□□□□ -1.31
NEDD4P46934 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 AC021876.1-201ENST00000425959 359 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.88□□□□□ -1.31
NEDD4P46934 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.88□□□□□ -1.31
NEDD4P46934 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.88□□□□□ -1.31
NEDD4P46934 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.88□□□□□ -1.31
NEDD4P46934 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.88□□□□□ -1.31
NEDD4P46934 AC023141.8-201ENST00000442554 208 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.88□□□□□ -1.31
NEDD4P46934 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.88□□□□□ -1.31
NEDD4P46934 RPS23P6-201ENST00000466136 431 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 AC006539.1-201ENST00000481419 501 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.88□□□□□ -1.31
NEDD4P46934 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 GAPDHP71-201ENST00000511530 1003 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.88□□□□□ -1.31
NEDD4P46934 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.88□□□□□ -1.31
NEDD4P46934 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.88□□□□□ -1.31
NEDD4P46934 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.88□□□□□ -1.31
NEDD4P46934 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.88□□□□□ -1.31
NEDD4P46934 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 AP001962.1-201ENST00000624114 559 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 MAPK10-350ENST00000641777 965 ntBASIC6.88□□□□□ -1.31
NEDD4P46934 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.88□□□□□ -1.31
NEDD4P46934 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.88□□□□□ -1.31
NEDD4P46934 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEDD4P46934 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.87□□□□□ -1.31
NEDD4P46934 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEDD4P46934 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
NEDD4P46934 SNORD1C-201ENST00000363315 78 ntBASIC6.87□□□□□ -1.31
NEDD4P46934 NEPNP-201ENST00000404786 1371 ntBASIC6.87□□□□□ -1.31
NEDD4P46934 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.87□□□□□ -1.31
NEDD4P46934 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.87□□□□□ -1.31
NEDD4P46934 OR5W1P-201ENST00000423705 938 ntBASIC6.87□□□□□ -1.31
NEDD4P46934 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.87□□□□□ -1.31
NEDD4P46934 DEFA9P-201ENST00000433042 285 ntBASIC6.87□□□□□ -1.31
NEDD4P46934 AC073410.1-201ENST00000435125 589 ntBASIC6.87□□□□□ -1.31
NEDD4P46934 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NEDD4P46934 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.87□□□□□ -1.31
NEDD4P46934 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.87□□□□□ -1.31
NEDD4P46934 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.87□□□□□ -1.31
NEDD4P46934 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEDD4P46934 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.87□□□□□ -1.31
NEDD4P46934 SNORD46.2-201ENST00000516021 102 ntBASIC6.87□□□□□ -1.31
NEDD4P46934 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
NEDD4P46934 AC139365.2-201ENST00000517972 253 ntBASIC6.87□□□□□ -1.31
NEDD4P46934 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEDD4P46934 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.87□□□□□ -1.31
NEDD4P46934 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.87□□□□□ -1.31
NEDD4P46934 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.87□□□□□ -1.31
NEDD4P46934 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.87□□□□□ -1.31
NEDD4P46934 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.87□□□□□ -1.31
NEDD4P46934 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEDD4P46934 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NEDD4P46934 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
NEDD4P46934 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
NEDD4P46934 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.87□□□□□ -1.31
NEDD4P46934 AC007114.2-201ENST00000576014 4281 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEDD4P46934 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEDD4P46934 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
NEDD4P46934 WDR95P-201ENST00000425638 1542 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEDD4P46934 FUNDC2P3-201ENST00000334716 533 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
NEDD4P46934 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NEDD4P46934 RN7SKP292-201ENST00000365522 317 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
NEDD4P46934 OR7E101P-201ENST00000400428 513 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.86□□□□□ -1.31
NEDD4P46934 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NEDD4P46934 OSTCP1-201ENST00000455507 450 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 snoU13.29-201ENST00000459370 104 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 RPSAP37-201ENST00000470913 821 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
NEDD4P46934 PSMA2P2-201ENST00000504319 686 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 AC022826.1-201ENST00000519383 805 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 SCARNA9-201ENST00000530422 353 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.86□□□□□ -1.31
NEDD4P46934 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.86□□□□□ -1.31
NEDD4P46934 NPM1P42-201ENST00000560329 862 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 DPPA2P4-201ENST00000563717 878 ntBASIC6.86□□□□□ -1.31
NEDD4P46934 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms