Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 MIR323A-201ENST00000362199 86 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 RNA5SP211-201ENST00000365516 117 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 RN7SKP229-201ENST00000410465 302 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 RN7SKP286-201ENST00000410894 299 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 AC093155.2-201ENST00000420734 937 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.31□□□□□ -1.4
BRCC3P46736 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.31□□□□□ -1.4
BRCC3P46736 YWHAEP1-201ENST00000453697 763 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 AC023141.9-201ENST00000458734 412 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 AC093719.1-201ENST00000480427 441 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 RN7SL284P-201ENST00000498823 275 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCC3P46736 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.31□□□□□ -1.4
BRCC3P46736 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
BRCC3P46736 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
BRCC3P46736 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
BRCC3P46736 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 CCAT2-201ENST00000630920 1752 ntBASIC6.31□□□□□ -1.4
BRCC3P46736 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCC3P46736 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
BRCC3P46736 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
BRCC3P46736 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 MTCO1P11-201ENST00000429111 1528 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 HMGB1P20-201ENST00000402555 677 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCC3P46736 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.3□□□□□ -1.4
BRCC3P46736 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 AC242426.1-201ENST00000435270 960 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.3□□□□□ -1.4
BRCC3P46736 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.3□□□□□ -1.4
BRCC3P46736 NENFP3-201ENST00000503735 313 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 GAPDHP71-201ENST00000511530 1003 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.3□□□□□ -1.4
BRCC3P46736 CYCSP22-201ENST00000517555 339 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 AC091078.2-201ENST00000557145 559 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 AC004890.3-201ENST00000605566 1095 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 AC145423.1-201ENST00000605712 336 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 AC004477.3-201ENST00000614061 590 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BRCC3P46736 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCC3P46736 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCC3P46736 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
BRCC3P46736 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 AL162456.1-201ENST00000634535 2006 ntBASIC6.3□□□□□ -1.4
BRCC3P46736 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BRCC3P46736 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCC3P46736 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
BRCC3P46736 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.29□□□□□ -1.4
BRCC3P46736 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BRCC3P46736 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 RNA5SP394-201ENST00000364216 119 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AP003170.5-201ENST00000397185 335 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 MYL6P5-201ENST00000412707 459 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 RPS17P17-201ENST00000419392 409 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.29□□□□□ -1.4
BRCC3P46736 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCC3P46736 AL663074.2-201ENST00000440621 479 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 AL162739.1-201ENST00000450606 307 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 RPS23P6-201ENST00000466136 431 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AL157777.1-201ENST00000468100 304 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms