Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CHRNA3P32297 WDR95P-201ENST00000425638 1542 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA3P32297 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA3P32297 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA3P32297 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CHRNA3P32297 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 OR3D1P-201ENST00000438288 955 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AL512593.1-201ENST00000444758 779 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 AC068228.1-201ENST00000461723 211 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC093225.1-201ENST00000506867 1408 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC092332.1-201ENST00000563684 829 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC006115.2-201ENST00000596823 202 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC092266.1-201ENST00000610958 165 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 RFPL4AP6-201ENST00000616792 846 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA3P32297 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA3P32297 LYARP1-201ENST00000436977 1501 ntBASIC6.29□□□□□ -1.4
CHRNA3P32297 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA3P32297 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CHRNA3P32297 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA3P32297 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA3P32297 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA3P32297 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 RNA5SP375-201ENST00000362975 119 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
CHRNA3P32297 SNORA51.9-201ENST00000384295 124 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA3P32297 MIR1282-201ENST00000408865 101 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC130360.1-201ENST00000425489 1117 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA3P32297 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA3P32297 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 HMGN1P2-201ENST00000445197 310 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 AC009963.4-201ENST00000448535 339 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 ACA64.4-201ENST00000459070 127 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA3P32297 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA3P32297 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.28□□□□□ -1.4
CHRNA3P32297 IGKV3D-25-201ENST00000519599 235 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC130365.2-201ENST00000525882 1201 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA3P32297 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 NDUFA5P11-201ENST00000567995 343 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC060780.2-201ENST00000589047 198 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.28□□□□□ -1.4
CHRNA3P32297 AL031658.2-201ENST00000616850 651 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CHRNA3P32297 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CHRNA3P32297 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 AC005261.2-201ENST00000593427 4258 ntBASIC6.28□□□□□ -1.4
CHRNA3P32297 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHRNA3P32297 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.4
CHRNA3P32297 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.27□□□□□ -1.41
CHRNA3P32297 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.27□□□□□ -1.41
CHRNA3P32297 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms