Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXC12P31275 AC073488.7-201ENST00000633785 778 ntBASIC6.5□□□□□ -1.37
HOXC12P31275 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXC12P31275 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC6.5□□□□□ -1.37
HOXC12P31275 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXC12P31275 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXC12P31275 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXC12P31275 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC12P31275 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC12P31275 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC12P31275 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC12P31275 AC026464.2-201ENST00000567834 2421 ntBASIC6.5□□□□□ -1.37
HOXC12P31275 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXC12P31275 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
HOXC12P31275 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXC12P31275 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC12P31275 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HOXC12P31275 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC12P31275 WNK1-220ENST00000574564 1401 ntBASIC6.5□□□□□ -1.37
HOXC12P31275 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
HOXC12P31275 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 AP003471.1-202ENST00000319051 1988 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 AL359263.1-201ENST00000441188 2796 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HOXC12P31275 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 FABP12P1-201ENST00000401911 322 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 RN7SKP221-201ENST00000410420 301 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AL355862.1-201ENST00000412705 353 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC004074.1-201ENST00000421810 1063 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 RPS3AP44-201ENST00000425466 790 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 FTH1P5-201ENST00000425761 545 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC073900.1-201ENST00000429766 776 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 RPL5P27-201ENST00000437011 881 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 AL354941.1-201ENST00000438600 464 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 NPM1P33-201ENST00000438918 872 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 MTCO2P18-201ENST00000457151 658 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 RPS27AP2-201ENST00000457576 465 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 CCNJP2-201ENST00000457810 1163 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 RN7SL751P-201ENST00000473281 284 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AC015820.1-201ENST00000473882 321 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC025271.1-201ENST00000485045 429 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 OR11I1P-201ENST00000486033 954 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXC12P31275 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 RPL12P22-201ENST00000519073 490 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC068631.3-201ENST00000538831 225 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.49□□□□□ -1.37
HOXC12P31275 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC126323.4-201ENST00000566935 234 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 AC010738.1-201ENST00000604970 987 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 RPL12P48-201ENST00000605620 304 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC12P31275 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXC12P31275 AL139123.1-201ENST00000612008 430 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AL592148.2-201ENST00000612210 372 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AL161931.1-201ENST00000612768 246 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AL359757.1-201ENST00000623176 255 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXC12P31275 AC084035.1-201ENST00000634543 607 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms