Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RPS26P11-201ENST00000463445 348 ntBASIC6.05□□□□□ -1.44
CD40P25942 RPS26P6-201ENST00000475156 348 ntBASIC6.05□□□□□ -1.44
CD40P25942 AC091959.2-201ENST00000477363 321 ntBASIC6.05□□□□□ -1.44
CD40P25942 RPS4XP17-201ENST00000479057 754 ntBASIC6.05□□□□□ -1.44
CD40P25942 RPL5P33-201ENST00000487833 905 ntBASIC6.05□□□□□ -1.44
CD40P25942 RPL23AP80-201ENST00000495605 424 ntBASIC6.05□□□□□ -1.44
CD40P25942 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.05□□□□□ -1.44
CD40P25942 AC090058.1-201ENST00000498788 435 ntBASIC6.05□□□□□ -1.44
CD40P25942 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 AC055733.3-201ENST00000505214 523 ntBASIC6.05□□□□□ -1.44
CD40P25942 OR5H4P-201ENST00000510851 923 ntBASIC6.05□□□□□ -1.44
CD40P25942 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.05□□□□□ -1.44
CD40P25942 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 AC113191.1-201ENST00000517759 403 ntBASIC6.05□□□□□ -1.44
CD40P25942 PTTG3P-201ENST00000521862 606 ntBASIC6.05□□□□□ -1.44
CD40P25942 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 AC090888.1-201ENST00000561335 1141 ntBASIC6.05□□□□□ -1.44
CD40P25942 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.05□□□□□ -1.44
CD40P25942 SS18L2P2-201ENST00000583960 235 ntBASIC6.05□□□□□ -1.44
CD40P25942 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.05□□□□□ -1.44
CD40P25942 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.05□□□□□ -1.44
CD40P25942 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 AL356274.1-201ENST00000617064 410 ntBASIC6.05□□□□□ -1.44
CD40P25942 AL035661.1-201ENST00000620459 1144 ntBASIC6.05□□□□□ -1.44
CD40P25942 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 GTF2H2B-203ENST00000508065 1432 ntBASIC6.05□□□□□ -1.44
CD40P25942 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CD40P25942 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 CCT8P1-201ENST00000413611 1657 ntBASIC6.04□□□□□ -1.44
CD40P25942 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.04□□□□□ -1.44
CD40P25942 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.04□□□□□ -1.44
CD40P25942 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 AC010329.1-201ENST00000593903 8328 ntBASIC6.04□□□□□ -1.44
CD40P25942 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 TMSB4XP2-201ENST00000335179 210 ntBASIC6.04□□□□□ -1.44
CD40P25942 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
CD40P25942 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CD40P25942 SUMO2P13-201ENST00000403109 272 ntBASIC6.04□□□□□ -1.44
CD40P25942 RNA5SP498-201ENST00000411342 120 ntBASIC6.04□□□□□ -1.44
CD40P25942 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 RPL18AP14-201ENST00000417685 526 ntBASIC6.04□□□□□ -1.44
CD40P25942 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.04□□□□□ -1.44
CD40P25942 RPL7P53-201ENST00000421245 739 ntBASIC6.04□□□□□ -1.44
CD40P25942 TNPO1P1-201ENST00000423641 1138 ntBASIC6.04□□□□□ -1.44
CD40P25942 AL390023.1-201ENST00000428836 262 ntBASIC6.04□□□□□ -1.44
CD40P25942 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 AC234064.1-201ENST00000436312 247 ntBASIC6.04□□□□□ -1.44
CD40P25942 AC092393.1-201ENST00000439625 742 ntBASIC6.04□□□□□ -1.44
CD40P25942 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.04□□□□□ -1.44
CD40P25942 CUBNP2-201ENST00000443534 1139 ntBASIC6.04□□□□□ -1.44
CD40P25942 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.04□□□□□ -1.44
CD40P25942 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.04□□□□□ -1.44
CD40P25942 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.04□□□□□ -1.44
CD40P25942 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.04□□□□□ -1.44
CD40P25942 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD40P25942 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 RANP1-206ENST00000455094 651 ntBASIC6.04□□□□□ -1.44
CD40P25942 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 PPP1R2P6-201ENST00000478565 588 ntBASIC6.04□□□□□ -1.44
CD40P25942 RN7SL655P-201ENST00000486087 298 ntBASIC6.04□□□□□ -1.44
CD40P25942 RN7SL350P-201ENST00000492591 299 ntBASIC6.04□□□□□ -1.44
CD40P25942 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.04□□□□□ -1.44
CD40P25942 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.04□□□□□ -1.44
CD40P25942 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 C1GALT1P3-201ENST00000522049 819 ntBASIC6.04□□□□□ -1.44
CD40P25942 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.04□□□□□ -1.44
CD40P25942 ACTG1P15-201ENST00000570019 1063 ntBASIC6.04□□□□□ -1.44
CD40P25942 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.04□□□□□ -1.44
CD40P25942 MIR378C-201ENST00000578683 81 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms