Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL161756.3-201ENST00000641216 2071 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.63□□□□□ -1.51
COL5A1P20908 AL450996.1-201ENST00000445574 1202 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 AL162739.1-201ENST00000450606 307 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 AL606490.1-201ENST00000452266 765 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 RAB28P2-201ENST00000454299 641 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 RPS21P4-201ENST00000487122 248 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A1P20908 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 AL671862.1-201ENST00000515851 349 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 IGLV3-30-201ENST00000524362 298 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A1P20908 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A1P20908 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.63□□□□□ -1.51
COL5A1P20908 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A1P20908 RNU4ATAC-201ENST00000580972 127 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 AC025470.1-201ENST00000510053 2032 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.63□□□□□ -1.51
COL5A1P20908 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
COL5A1P20908 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A1P20908 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL5A1P20908 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.62□□□□□ -1.51
COL5A1P20908 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.62□□□□□ -1.51
COL5A1P20908 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 CBX1P5-201ENST00000475330 559 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 RPL23AP40-201ENST00000487630 390 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 AC093763.2-201ENST00000505334 1223 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 CYP4F27P-201ENST00000514557 494 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.62□□□□□ -1.51
COL5A1P20908 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 AL390318.1-201ENST00000624564 687 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 AC087516.1-201ENST00000561236 2428 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC5.62□□□□□ -1.51
COL5A1P20908 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL5A1P20908 RNA5SP507-201ENST00000363603 121 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.62□□□□□ -1.51
COL5A1P20908 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 METTL15P3-201ENST00000415522 1221 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.62□□□□□ -1.51
COL5A1P20908 AL133173.1-201ENST00000423458 397 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 AC016027.5-201ENST00000427227 210 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 OR7E116P-201ENST00000448529 957 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 AC087672.1-201ENST00000479876 766 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 AC009120.1-201ENST00000493458 473 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 CDC42P3-201ENST00000518493 633 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.62□□□□□ -1.51
COL5A1P20908 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms