Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CD28P10747 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CD28P10747 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 RNU105B-201ENST00000364478 208 ntBASIC4.7□□□□□ -1.66
CD28P10747 RN7SKP292-201ENST00000365522 317 ntBASIC4.7□□□□□ -1.66
CD28P10747 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.7□□□□□ -1.66
CD28P10747 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 RNU6-316P-201ENST00000391027 107 ntBASIC4.7□□□□□ -1.66
CD28P10747 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.7□□□□□ -1.66
CD28P10747 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.7□□□□□ -1.66
CD28P10747 RPS15AP30-201ENST00000420976 390 ntBASIC4.7□□□□□ -1.66
CD28P10747 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 BX119321.1-201ENST00000428912 797 ntBASIC4.7□□□□□ -1.66
CD28P10747 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.7□□□□□ -1.66
CD28P10747 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.7□□□□□ -1.66
CD28P10747 AL512637.1-201ENST00000439523 1231 ntBASIC4.7□□□□□ -1.66
CD28P10747 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.7□□□□□ -1.66
CD28P10747 AL512593.1-201ENST00000444758 779 ntBASIC4.7□□□□□ -1.66
CD28P10747 AL451063.1-201ENST00000450164 1133 ntBASIC4.7□□□□□ -1.66
CD28P10747 AL445665.1-202ENST00000452436 324 ntBASIC4.7□□□□□ -1.66
CD28P10747 RN7SL269P-201ENST00000467795 305 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC074386.1-201ENST00000476560 767 ntBASIC4.7□□□□□ -1.66
CD28P10747 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 RN7SL273P-201ENST00000481561 299 ntBASIC4.7□□□□□ -1.66
CD28P10747 RN7SL214P-201ENST00000487317 265 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC114728.1-201ENST00000488289 483 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC083795.1-201ENST00000491760 320 ntBASIC4.7□□□□□ -1.66
CD28P10747 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.7□□□□□ -1.66
CD28P10747 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.7□□□□□ -1.66
CD28P10747 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.7□□□□□ -1.66
CD28P10747 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 MIR3189-201ENST00000578735 73 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC009237.12-201ENST00000604755 742 ntBASIC4.7□□□□□ -1.66
CD28P10747 FAM27E4-201ENST00000605259 342 ntBASIC4.7□□□□□ -1.66
CD28P10747 AL034374.2-201ENST00000605281 548 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC109309.2-201ENST00000612597 332 ntBASIC4.7□□□□□ -1.66
CD28P10747 RN7SL787P-201ENST00000613000 284 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC063952.1-203ENST00000634410 658 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC022726.2-201ENST00000634673 547 ntBASIC4.7□□□□□ -1.66
CD28P10747 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CD28P10747 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 ZNF658B-201ENST00000602828 3408 ntBASIC4.7□□□□□ -1.66
CD28P10747 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CD28P10747 AC034229.2-201ENST00000566945 2508 ntBASIC4.7□□□□□ -1.66
CD28P10747 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD28P10747 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 HDAC1P2-201ENST00000453661 1398 ntBASIC4.69□□□□□ -1.66
CD28P10747 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CD28P10747 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CD28P10747 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
CD28P10747 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.69□□□□□ -1.66
CD28P10747 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD28P10747 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 OR10R3P-201ENST00000361688 942 ntBASIC4.69□□□□□ -1.66
CD28P10747 RNU1-150P-201ENST00000362491 162 ntBASIC4.69□□□□□ -1.66
CD28P10747 RN7SKP286-201ENST00000410894 299 ntBASIC4.69□□□□□ -1.66
CD28P10747 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.69□□□□□ -1.66
CD28P10747 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.69□□□□□ -1.66
CD28P10747 RPL35AP3-201ENST00000414680 288 ntBASIC4.69□□□□□ -1.66
CD28P10747 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC4.69□□□□□ -1.66
CD28P10747 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.69□□□□□ -1.66
CD28P10747 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD28P10747 AC009237.1-201ENST00000442127 744 ntBASIC4.69□□□□□ -1.66
CD28P10747 AC064862.4-201ENST00000442180 334 ntBASIC4.69□□□□□ -1.66
CD28P10747 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.69□□□□□ -1.66
CD28P10747 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD28P10747 YWHAEP1-201ENST00000453697 763 ntBASIC4.69□□□□□ -1.66
CD28P10747 RN7SL717P-201ENST00000478343 297 ntBASIC4.69□□□□□ -1.66
CD28P10747 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.69□□□□□ -1.66
CD28P10747 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.69□□□□□ -1.66
CD28P10747 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.69□□□□□ -1.66
CD28P10747 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.69□□□□□ -1.66
CD28P10747 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.69□□□□□ -1.66
CD28P10747 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.69□□□□□ -1.66
CD28P10747 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.69□□□□□ -1.66
CD28P10747 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.69□□□□□ -1.66
CD28P10747 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.69□□□□□ -1.66
CD28P10747 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC4.69□□□□□ -1.66
CD28P10747 AC020978.7-201ENST00000575953 1187 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms