Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC4P09017 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC4P09017 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC4P09017 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC4P09017 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC4P09017 SETP20-201ENST00000457046 852 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 ACA64.4-201ENST00000459070 127 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 CR383656.1-201ENST00000484916 377 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 NENFP3-201ENST00000503735 313 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 SNORA70.20-201ENST00000516848 126 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 TMEM97P2-201ENST00000517841 403 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC4P09017 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC4P09017 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC4P09017 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
HOXC4P09017 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC4P09017 AC135626.1-201ENST00000556983 435 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 AL049779.3-201ENST00000557141 606 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 AC012146.2-201ENST00000576545 416 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC4P09017 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC4P09017 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC4P09017 FAM27E4-201ENST00000605259 342 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 RPL12P48-201ENST00000605620 304 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC4P09017 MIR4302-201ENST00000638058 60 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC4P09017 RNF19BPY-201ENST00000458209 1550 ntBASIC5.83□□□□□ -1.48
HOXC4P09017 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC4P09017 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC4P09017 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC4P09017 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
HOXC4P09017 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC4P09017 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC4P09017 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC4P09017 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC4P09017 NEPNP-201ENST00000404786 1371 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC4P09017 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC4P09017 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC4P09017 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC4P09017 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC4P09017 RN7SKP78-201ENST00000364711 318 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 SNORA70.9-201ENST00000384370 135 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 RN7SKP206-201ENST00000410823 293 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 AC093155.2-201ENST00000420734 937 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXC4P09017 AC126120.1-201ENST00000431082 470 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXC4P09017 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC4P09017 AC093815.1-201ENST00000508637 280 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC4P09017 MIR4420-201ENST00000583944 77 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXC4P09017 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC4P09017 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 PARP4P2-201ENST00000446672 3326 ntBASIC5.82□□□□□ -1.48
HOXC4P09017 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
HOXC4P09017 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC4P09017 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC4P09017 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC4P09017 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC4P09017 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
HOXC4P09017 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC4P09017 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC4P09017 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HOXC4P09017 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC4P09017 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC4P09017 AC011504.1-201ENST00000623331 4103 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC4P09017 RN7SKP81-201ENST00000365603 331 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC4P09017 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC4P09017 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HOXC4P09017 MIR323B-201ENST00000385269 82 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HOXC4P09017 AL360271.1-201ENST00000395679 510 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 AL512422.1-201ENST00000407033 553 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 RNA5SP178-201ENST00000410380 128 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC4P09017 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.81□□□□□ -1.48
HOXC4P09017 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC4P09017 RPL34P3-201ENST00000421454 338 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC4P09017 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC4P09017 DEFA9P-201ENST00000433042 285 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 AL161636.2-201ENST00000445179 927 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 HMGN1P36-201ENST00000446623 298 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC4P09017 UBFD1P1-201ENST00000473259 814 ntBASIC5.81□□□□□ -1.48
HOXC4P09017 PFN1P6-201ENST00000476786 399 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms