Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC242426.1-201ENST00000435270 960 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AL161636.2-201ENST00000445179 927 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AL445665.1-202ENST00000452436 324 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC112187.1-201ENST00000455837 479 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 RN7SL352P-201ENST00000466002 277 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 RN7SL174P-201ENST00000475578 289 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC113398.2-201ENST00000507630 558 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 OR8K2P-201ENST00000524645 927 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 OR4H6P-201ENST00000563771 921 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AL049840.6-201ENST00000604583 345 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC009269.6-201ENST00000621778 588 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC110373.1-201ENST00000505994 3505 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AOX3P-204ENST00000491025 2107 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HLA-DOAP06340 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC106872.5-201ENST00000508856 1416 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 FO393409.1-201ENST00000399325 1372 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HLA-DOAP06340 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 SELENOWP1-201ENST00000322792 252 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 MIR323A-201ENST00000362199 86 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 RN7SKP128-201ENST00000364270 303 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 RN7SKP292-201ENST00000365522 317 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 KIF4CP-201ENST00000422742 1279 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HLA-DOAP06340 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 MTND4P15-201ENST00000437913 1033 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 UBFD1P1-201ENST00000473259 814 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 FAM27E4-201ENST00000605259 342 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC015849.6-201ENST00000605454 474 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC126175.1-201ENST00000617041 758 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC022306.3-201ENST00000619930 550 ntBASIC7.12□□□□□ -1.27
HLA-DOAP06340 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HLA-DOAP06340 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HLA-DOAP06340 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HLA-DOAP06340 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HLA-DOAP06340 AL022323.4-201ENST00000623980 13120 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 CR383656.5-201ENST00000547616 1340 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms