Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 RN7SL612P-201ENST00000497704 295 ntBASIC4.98□□□□□ -1.61
CD74P04233 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 OR56A7P-201ENST00000524865 941 ntBASIC4.98□□□□□ -1.61
CD74P04233 OR4A42P-201ENST00000531397 938 ntBASIC4.98□□□□□ -1.61
CD74P04233 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.98□□□□□ -1.61
CD74P04233 AL359219.2-201ENST00000555184 348 ntBASIC4.98□□□□□ -1.61
CD74P04233 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.98□□□□□ -1.61
CD74P04233 AC010287.1-201ENST00000566916 357 ntBASIC4.98□□□□□ -1.61
CD74P04233 MIR4660-201ENST00000583549 74 ntBASIC4.98□□□□□ -1.61
CD74P04233 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 AL445670.1-201ENST00000618889 801 ntBASIC4.98□□□□□ -1.61
CD74P04233 AL138693.1-201ENST00000622219 129 ntBASIC4.98□□□□□ -1.61
CD74P04233 AC138965.3-201ENST00000623875 498 ntBASIC4.98□□□□□ -1.61
CD74P04233 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.98□□□□□ -1.61
CD74P04233 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 AC007342.5-201ENST00000571340 2142 ntBASIC4.97□□□□□ -1.61
CD74P04233 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 OR9K1P-202ENST00000641111 3217 ntBASIC4.97□□□□□ -1.61
CD74P04233 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 AC083899.1-201ENST00000454465 3819 ntBASIC4.97□□□□□ -1.61
CD74P04233 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 RN7SKP78-201ENST00000364711 318 ntBASIC4.97□□□□□ -1.61
CD74P04233 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 AL096829.1-201ENST00000413677 457 ntBASIC4.97□□□□□ -1.61
CD74P04233 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.97□□□□□ -1.61
CD74P04233 NMD3P2-201ENST00000421815 761 ntBASIC4.97□□□□□ -1.61
CD74P04233 OR10T1P-201ENST00000424327 947 ntBASIC4.97□□□□□ -1.61
CD74P04233 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 AL022324.2-201ENST00000434827 780 ntBASIC4.97□□□□□ -1.61
CD74P04233 OR3D1P-201ENST00000438288 955 ntBASIC4.97□□□□□ -1.61
CD74P04233 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.97□□□□□ -1.61
CD74P04233 GAPDHP14-201ENST00000450472 937 ntBASIC4.97□□□□□ -1.61
CD74P04233 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 AC104164.1-201ENST00000460282 590 ntBASIC4.97□□□□□ -1.61
CD74P04233 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.97□□□□□ -1.61
CD74P04233 RPS4XP17-201ENST00000479057 754 ntBASIC4.97□□□□□ -1.61
CD74P04233 RN7SL413P-201ENST00000482700 297 ntBASIC4.97□□□□□ -1.61
CD74P04233 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.97□□□□□ -1.61
CD74P04233 AC093664.1-201ENST00000511779 289 ntBASIC4.97□□□□□ -1.61
CD74P04233 MIR2117-201ENST00000516780 80 ntBASIC4.97□□□□□ -1.61
CD74P04233 RNA5SP230-201ENST00000517039 122 ntBASIC4.97□□□□□ -1.61
CD74P04233 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.97□□□□□ -1.61
CD74P04233 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.97□□□□□ -1.61
CD74P04233 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.97□□□□□ -1.61
CD74P04233 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.97□□□□□ -1.61
CD74P04233 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.97□□□□□ -1.61
CD74P04233 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.97□□□□□ -1.61
CD74P04233 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 AL162574.1-201ENST00000615702 950 ntBASIC4.97□□□□□ -1.61
CD74P04233 AC096861.1-201ENST00000616652 240 ntBASIC4.97□□□□□ -1.61
CD74P04233 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.97□□□□□ -1.61
CD74P04233 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CD74P04233 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 AC011933.2-201ENST00000578539 2790 ntBASIC4.97□□□□□ -1.61
CD74P04233 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 MFSD8-239ENST00000641590 2479 ntBASIC4.97□□□□□ -1.61
CD74P04233 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.97□□□□□ -1.61
CD74P04233 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD74P04233 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms