Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.27□□□□□ -1.41
APOEP02649 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 AC018690.1-201ENST00000608144 626 ntBASIC6.27□□□□□ -1.41
APOEP02649 AL136097.3-201ENST00000611097 505 ntBASIC6.27□□□□□ -1.41
APOEP02649 AC069234.4-201ENST00000621276 412 ntBASIC6.27□□□□□ -1.41
APOEP02649 AC129778.1-202ENST00000623812 261 ntBASIC6.27□□□□□ -1.41
APOEP02649 AL591379.1-207ENST00000635982 261 ntBASIC6.27□□□□□ -1.41
APOEP02649 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.27□□□□□ -1.41
APOEP02649 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
APOEP02649 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
APOEP02649 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
APOEP02649 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
APOEP02649 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
APOEP02649 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
APOEP02649 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
APOEP02649 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
APOEP02649 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.26□□□□□ -1.41
APOEP02649 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.26□□□□□ -1.41
APOEP02649 AC012254.3-201ENST00000591183 2117 ntBASIC6.26□□□□□ -1.41
APOEP02649 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
APOEP02649 NLRP3P1-201ENST00000622303 1785 ntBASIC6.26□□□□□ -1.41
APOEP02649 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
APOEP02649 AC016583.1-201ENST00000624221 2431 ntBASIC6.26□□□□□ -1.41
APOEP02649 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
APOEP02649 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
APOEP02649 AL096800.1-201ENST00000405326 893 ntBASIC6.26□□□□□ -1.41
APOEP02649 SNRPEP6-201ENST00000407465 277 ntBASIC6.26□□□□□ -1.41
APOEP02649 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.26□□□□□ -1.41
APOEP02649 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.26□□□□□ -1.41
APOEP02649 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.26□□□□□ -1.41
APOEP02649 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.26□□□□□ -1.41
APOEP02649 NMD3P2-201ENST00000421815 761 ntBASIC6.26□□□□□ -1.41
APOEP02649 AC117394.1-201ENST00000477323 567 ntBASIC6.26□□□□□ -1.41
APOEP02649 AC124945.1-201ENST00000485133 188 ntBASIC6.26□□□□□ -1.41
APOEP02649 RPL23AP40-201ENST00000487630 390 ntBASIC6.26□□□□□ -1.41
APOEP02649 AC026782.2-201ENST00000510845 636 ntBASIC6.26□□□□□ -1.41
APOEP02649 SCARNA18.1-201ENST00000516330 83 ntBASIC6.26□□□□□ -1.41
APOEP02649 RNA5SP340-201ENST00000517132 107 ntBASIC6.26□□□□□ -1.41
APOEP02649 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.26□□□□□ -1.41
APOEP02649 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.26□□□□□ -1.41
APOEP02649 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.26□□□□□ -1.41
APOEP02649 DPPA3P2-202ENST00000557188 1219 ntBASIC6.26□□□□□ -1.41
APOEP02649 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.26□□□□□ -1.41
APOEP02649 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.26□□□□□ -1.41
APOEP02649 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.26□□□□□ -1.41
APOEP02649 AP005119.1-201ENST00000580956 292 ntBASIC6.26□□□□□ -1.41
APOEP02649 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.26□□□□□ -1.41
APOEP02649 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.26□□□□□ -1.41
APOEP02649 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
APOEP02649 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.26□□□□□ -1.41
APOEP02649 AL138895.2-201ENST00000603019 178 ntBASIC6.26□□□□□ -1.41
APOEP02649 LSM1P2-201ENST00000604911 322 ntBASIC6.26□□□□□ -1.41
APOEP02649 MIR6778-201ENST00000617912 73 ntBASIC6.26□□□□□ -1.41
APOEP02649 AL357562.1-201ENST00000624911 609 ntBASIC6.26□□□□□ -1.41
APOEP02649 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
APOEP02649 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
APOEP02649 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
APOEP02649 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.26□□□□□ -1.41
APOEP02649 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.26□□□□□ -1.41
APOEP02649 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.26□□□□□ -1.41
APOEP02649 AC232271.1-201ENST00000602455 2715 ntBASIC6.26□□□□□ -1.41
APOEP02649 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.25□□□□□ -1.41
APOEP02649 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 RBPJP7-201ENST00000442803 1447 ntBASIC6.25□□□□□ -1.41
APOEP02649 RBPJP5-201ENST00000449433 1447 ntBASIC6.25□□□□□ -1.41
APOEP02649 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
APOEP02649 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
APOEP02649 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.25□□□□□ -1.41
APOEP02649 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
APOEP02649 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
APOEP02649 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
APOEP02649 RN7SKP166-201ENST00000410812 305 ntBASIC6.25□□□□□ -1.41
APOEP02649 PTCD2P2-201ENST00000415579 1095 ntBASIC6.25□□□□□ -1.41
APOEP02649 AC117434.1-201ENST00000419971 836 ntBASIC6.25□□□□□ -1.41
APOEP02649 AL365220.1-201ENST00000432923 399 ntBASIC6.25□□□□□ -1.41
APOEP02649 PCNPP2-201ENST00000441651 455 ntBASIC6.25□□□□□ -1.41
APOEP02649 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.25□□□□□ -1.41
APOEP02649 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.25□□□□□ -1.41
APOEP02649 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.25□□□□□ -1.41
APOEP02649 AC025458.1-201ENST00000506046 166 ntBASIC6.25□□□□□ -1.41
APOEP02649 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.25□□□□□ -1.41
APOEP02649 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.25□□□□□ -1.41
APOEP02649 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.25□□□□□ -1.41
APOEP02649 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.25□□□□□ -1.41
APOEP02649 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.25□□□□□ -1.41
APOEP02649 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.25□□□□□ -1.41
APOEP02649 AC090826.1-203ENST00000569235 490 ntBASIC6.25□□□□□ -1.41
APOEP02649 AC119403.2-201ENST00000590960 598 ntBASIC6.25□□□□□ -1.41
APOEP02649 AC067773.1-201ENST00000603284 1094 ntBASIC6.25□□□□□ -1.41
APOEP02649 AC024884.1-201ENST00000620583 399 ntBASIC6.25□□□□□ -1.41
APOEP02649 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.25□□□□□ -1.41
APOEP02649 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms