Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CLDN9O95484 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN9O95484 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN9O95484 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN9O95484 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN9O95484 AC008627.1-201ENST00000517511 1704 ntBASIC5.71□□□□□ -1.5
CLDN9O95484 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLDN9O95484 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CLDN9O95484 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CLDN9O95484 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLDN9O95484 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLDN9O95484 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 TRAV35-201ENST00000390462 330 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 GCNT1P4-201ENST00000404096 329 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 OR2W4P-201ENST00000406496 926 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 CRIP1P1-201ENST00000427567 185 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 RPS12P17-201ENST00000438591 377 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 RPSAP41-201ENST00000439695 860 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 AC097463.1-201ENST00000447288 481 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 FRG2FP-204ENST00000453982 852 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 RNU1-88P-201ENST00000459274 128 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 RN7SL269P-201ENST00000467795 305 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 AC091874.2-201ENST00000505889 720 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 PRMT5P1-201ENST00000514351 598 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 GTF2IP11-201ENST00000526931 420 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.7□□□□□ -1.5
CLDN9O95484 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN9O95484 AC060780.2-201ENST00000589047 198 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 AL021918.2-201ENST00000613415 194 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 AC096708.4-201ENST00000620563 552 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 AC111152.1-202ENST00000635848 339 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN9O95484 MSL3P1-202ENST00000440028 1468 ntBASIC5.7□□□□□ -1.5
CLDN9O95484 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN9O95484 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CLDN9O95484 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN9O95484 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN9O95484 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLDN9O95484 CAP1P2-201ENST00000417455 1409 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 AL158152.1-201ENST00000602652 1435 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 SELENOWP1-201ENST00000322792 252 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN9O95484 RNA5SP232-201ENST00000364144 119 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 RPL11P3-201ENST00000395256 523 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN9O95484 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN9O95484 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN9O95484 RPL24P2-201ENST00000421023 475 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN9O95484 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN9O95484 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN9O95484 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN9O95484 BMS1P10-201ENST00000443754 1120 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 EEF1B2P3-201ENST00000447718 678 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 PDCL3P4-201ENST00000489621 720 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 Vault.2-201ENST00000516519 98 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 AC009879.1-201ENST00000520029 839 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN9O95484 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN9O95484 GARSP1-201ENST00000570895 719 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 TXNP4-201ENST00000575018 310 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 AP005119.1-201ENST00000580956 292 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN9O95484 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN9O95484 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN9O95484 AC124916.2-201ENST00000604416 224 ntBASIC5.69□□□□□ -1.5
CLDN9O95484 AC145423.1-201ENST00000605712 336 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms