Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RAPGEF3O95398 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 FO082842.1-201ENST00000423552 1370 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 MIPEPP2-201ENST00000422560 1819 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
RAPGEF3O95398 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RAPGEF3O95398 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RAPGEF3O95398 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 OR2W4P-201ENST00000406496 926 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 AL357752.1-201ENST00000412817 349 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RAPGEF3O95398 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 CYCSP6-201ENST00000434498 302 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 AL606490.8-201ENST00000441624 319 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 AL035090.1-201ENST00000454835 332 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 RPL7P45-201ENST00000455851 743 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 RPS3AP15-201ENST00000483874 781 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 uc_338.26-201ENST00000612659 160 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 AL445528.2-201ENST00000620582 470 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 AC243960.7-201ENST00000623532 707 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RAPGEF3O95398 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
RAPGEF3O95398 AC127070.3-201ENST00000503695 3263 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RAPGEF3O95398 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.84□□□□□ -0.99
RAPGEF3O95398 MFSD8-217ENST00000641178 4374 ntBASIC8.84□□□□□ -0.99
RAPGEF3O95398 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.84□□□□□ -1
RAPGEF3O95398 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.84□□□□□ -1
RAPGEF3O95398 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
RAPGEF3O95398 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.83□□□□□ -1
RAPGEF3O95398 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.83□□□□□ -1
RAPGEF3O95398 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.83□□□□□ -1
RAPGEF3O95398 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 OR5W1P-201ENST00000423705 938 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 RSL24D1P8-201ENST00000434442 492 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 MGAT2P1-201ENST00000449718 797 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.83□□□□□ -1
RAPGEF3O95398 AC021678.3-201ENST00000517893 476 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.83□□□□□ -1
RAPGEF3O95398 OR6M2P-201ENST00000529831 871 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 AC126177.5-201ENST00000549599 178 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 GARSP1-201ENST00000570895 719 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.83□□□□□ -1
RAPGEF3O95398 AC092953.2-201ENST00000608000 699 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 AC073592.7-201ENST00000623659 507 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 AC116631.1-202ENST00000640984 683 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 AC092724.1-201ENST00000624623 3397 ntBASIC8.83□□□□□ -1
RAPGEF3O95398 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
RAPGEF3O95398 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.83□□□□□ -1
RAPGEF3O95398 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
RAPGEF3O95398 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
RAPGEF3O95398 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
RAPGEF3O95398 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.83□□□□□ -1
RAPGEF3O95398 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.82□□□□□ -1
RAPGEF3O95398 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 SNORA81-201ENST00000408493 178 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 RAB28P1-201ENST00000411517 641 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.82□□□□□ -1
RAPGEF3O95398 RPS6P14-201ENST00000425165 719 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 CEACAMP9-201ENST00000442990 513 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 SDC4P-201ENST00000453285 601 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 RPS27AP3-201ENST00000453803 454 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 AP000676.2-201ENST00000529711 301 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 AP004607.2-201ENST00000533949 322 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC8.82□□□□□ -1
RAPGEF3O95398 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC8.82□□□□□ -1
RAPGEF3O95398 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.82□□□□□ -1
RAPGEF3O95398 MIR378J-201ENST00000611988 109 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 AC132068.1-201ENST00000623805 459 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 AL390318.1-201ENST00000624564 687 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms