Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 AC016583.1-201ENST00000624221 2431 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.66□□□□□ -1.5
NKX2-2O95096 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NKX2-2O95096 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 SNORA21-201ENST00000362423 132 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 RNU105B-201ENST00000364478 208 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 YWHAZP6-201ENST00000399764 738 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 RNA5SP156-201ENST00000410250 110 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 RPL17P35-201ENST00000432217 549 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.66□□□□□ -1.5
NKX2-2O95096 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
NKX2-2O95096 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AP002453.1-201ENST00000492327 668 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AC113367.2-201ENST00000505749 160 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 AC108103.1-201ENST00000511286 446 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.66□□□□□ -1.5
NKX2-2O95096 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 MTND4LP25-201ENST00000570218 163 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 AC138207.8-204ENST00000579588 527 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 SMIM12P1-201ENST00000603004 274 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 AC005014.3-201ENST00000605985 190 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.66□□□□□ -1.5
NKX2-2O95096 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.66□□□□□ -1.5
NKX2-2O95096 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.66□□□□□ -1.5
NKX2-2O95096 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.66□□□□□ -1.5
NKX2-2O95096 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NKX2-2O95096 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-2O95096 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-2O95096 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-2O95096 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NKX2-2O95096 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 CCAT2-201ENST00000630920 1752 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-2O95096 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-2O95096 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-2O95096 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-2O95096 OR56A4-201ENST00000330728 1209 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 RNA5SP110-201ENST00000362638 115 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 RNA5SP375-201ENST00000362975 119 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-2O95096 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AL451142.1-201ENST00000375867 775 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 RPL23AP17-201ENST00000401064 499 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AL359885.1-201ENST00000415786 903 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 RPS7P8-201ENST00000418311 581 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 RPL35AP31-201ENST00000418340 337 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AC130360.1-201ENST00000425489 1117 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AL731534.1-201ENST00000434711 269 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 GAPDHP59-201ENST00000435908 267 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AL590762.3-201ENST00000436372 640 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AC010240.2-201ENST00000445363 1205 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AC002553.3-201ENST00000453002 341 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX2-2O95096 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-2O95096 RPL23AP40-201ENST00000487630 390 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 RPL9P15-201ENST00000491096 532 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-2O95096 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX2-2O95096 SNORA26.10-201ENST00000516427 141 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms