Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
SHOX2O60902 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.88□□□□□ -1.47
SHOX2O60902 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.88□□□□□ -1.47
SHOX2O60902 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.88□□□□□ -1.47
SHOX2O60902 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SHOX2O60902 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.88□□□□□ -1.47
SHOX2O60902 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 RN7SKP74-201ENST00000362849 309 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 U3.28-201ENST00000391249 210 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC211486.3-201ENST00000412694 621 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.88□□□□□ -1.47
SHOX2O60902 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 OR52E3P-201ENST00000452083 936 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC122714.1-201ENST00000502510 459 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 AC098976.1-201ENST00000513014 541 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 RN7SKP196-201ENST00000516267 345 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 RN7SKP70-201ENST00000516655 271 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 MIR2117-201ENST00000516780 80 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.88□□□□□ -1.47
SHOX2O60902 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.88□□□□□ -1.47
SHOX2O60902 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 RPS4XP21-201ENST00000603814 750 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 FBXL21-201ENST00000297158 1305 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 AC133552.1-201ENST00000569988 4007 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 OR5M2P-202ENST00000641241 4242 ntBASIC5.88□□□□□ -1.47
SHOX2O60902 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.88□□□□□ -1.47
SHOX2O60902 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.88□□□□□ -1.47
SHOX2O60902 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SHOX2O60902 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.88□□□□□ -1.47
SHOX2O60902 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHOX2O60902 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.87□□□□□ -1.47
SHOX2O60902 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHOX2O60902 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SHOX2O60902 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHOX2O60902 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHOX2O60902 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHOX2O60902 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHOX2O60902 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.87□□□□□ -1.47
SHOX2O60902 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.87□□□□□ -1.47
SHOX2O60902 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHOX2O60902 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.87□□□□□ -1.47
SHOX2O60902 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.87□□□□□ -1.47
SHOX2O60902 LINC00328-2P-201ENST00000436585 219 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 AL138899.2-201ENST00000439139 499 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.87□□□□□ -1.47
SHOX2O60902 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.87□□□□□ -1.47
SHOX2O60902 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.87□□□□□ -1.47
SHOX2O60902 RN7SKP198-201ENST00000459286 306 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 AC021660.1-201ENST00000465006 554 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.87□□□□□ -1.47
SHOX2O60902 Y_RNA.710-201ENST00000516975 110 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.87□□□□□ -1.47
SHOX2O60902 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.87□□□□□ -1.47
SHOX2O60902 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SHOX2O60902 AC137627.1-201ENST00000545761 289 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 AC005519.1-201ENST00000554490 601 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.87□□□□□ -1.47
SHOX2O60902 AC127381.1-201ENST00000555979 939 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.87□□□□□ -1.47
SHOX2O60902 NMNAT1P5-201ENST00000559657 841 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.87□□□□□ -1.47
SHOX2O60902 AC133552.4-201ENST00000576103 676 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.87□□□□□ -1.47
SHOX2O60902 FCGR1CP-201ENST00000579737 1127 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 MIR3936-201ENST00000584304 110 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 RPL29P33-201ENST00000587474 316 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.87□□□□□ -1.47
SHOX2O60902 AL591222.2-201ENST00000604443 754 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHOX2O60902 AC006453.3-201ENST00000635891 377 ntBASIC5.87□□□□□ -1.47
SHOX2O60902 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHOX2O60902 HSPD1P7-201ENST00000447985 1686 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms