Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.66□□□□□ -1.5
HCN1O60741 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN1O60741 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.66□□□□□ -1.5
HCN1O60741 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN1O60741 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN1O60741 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.66□□□□□ -1.5
HCN1O60741 AC008507.3-201ENST00000585753 472 ntBASIC5.66□□□□□ -1.5
HCN1O60741 GLYATL1P2-202ENST00000588046 902 ntBASIC5.66□□□□□ -1.5
HCN1O60741 DYNLL1P1-201ENST00000595442 269 ntBASIC5.66□□□□□ -1.5
HCN1O60741 RN7SL261P-201ENST00000613441 282 ntBASIC5.66□□□□□ -1.5
HCN1O60741 SNORA11.6-201ENST00000619030 128 ntBASIC5.66□□□□□ -1.5
HCN1O60741 AC069234.4-201ENST00000621276 412 ntBASIC5.66□□□□□ -1.5
HCN1O60741 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HCN1O60741 AC116158.1-201ENST00000560231 2129 ntBASIC5.66□□□□□ -1.5
HCN1O60741 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HCN1O60741 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HCN1O60741 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
HCN1O60741 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HCN1O60741 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN1O60741 SAMM50P1-201ENST00000455403 1399 ntBASIC5.66□□□□□ -1.5
HCN1O60741 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HCN1O60741 AC093225.1-201ENST00000506867 1408 ntBASIC5.65□□□□□ -1.5
HCN1O60741 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 AL359091.1-201ENST00000449048 1734 ntBASIC5.65□□□□□ -1.5
HCN1O60741 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HCN1O60741 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.65□□□□□ -1.5
HCN1O60741 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.65□□□□□ -1.5
HCN1O60741 RN7SKP15-201ENST00000364742 309 ntBASIC5.65□□□□□ -1.5
HCN1O60741 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.65□□□□□ -1.5
HCN1O60741 AL096800.1-201ENST00000405326 893 ntBASIC5.65□□□□□ -1.5
HCN1O60741 SNORA77.2-201ENST00000408571 112 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.65□□□□□ -1.5
HCN1O60741 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.65□□□□□ -1.5
HCN1O60741 AC009506.2-201ENST00000420635 840 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.65□□□□□ -1.5
HCN1O60741 PPIAP10-201ENST00000438675 458 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 AC144530.1-201ENST00000452862 555 ntBASIC5.65□□□□□ -1.5
HCN1O60741 PPIAP27-201ENST00000453800 265 ntBASIC5.65□□□□□ -1.5
HCN1O60741 PPIAP7-201ENST00000454070 489 ntBASIC5.65□□□□□ -1.5
HCN1O60741 NDUFA5P5-201ENST00000468361 342 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AC094085.1-201ENST00000468914 584 ntBASIC5.65□□□□□ -1.5
HCN1O60741 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.65□□□□□ -1.5
HCN1O60741 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.65□□□□□ -1.5
HCN1O60741 RPL34P33-201ENST00000486062 334 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.65□□□□□ -1.5
HCN1O60741 AC021733.2-201ENST00000518830 497 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AP000620.1-201ENST00000527147 504 ntBASIC5.65□□□□□ -1.5
HCN1O60741 OR6M2P-201ENST00000529831 871 ntBASIC5.65□□□□□ -1.5
HCN1O60741 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.65□□□□□ -1.5
HCN1O60741 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.65□□□□□ -1.5
HCN1O60741 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.65□□□□□ -1.5
HCN1O60741 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 AC105036.1-201ENST00000566222 271 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AC007346.1-201ENST00000569208 867 ntBASIC5.65□□□□□ -1.5
HCN1O60741 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 AC025857.2-201ENST00000602711 238 ntBASIC5.65□□□□□ -1.5
HCN1O60741 AL138895.2-201ENST00000603019 178 ntBASIC5.65□□□□□ -1.5
HCN1O60741 RNA5SP439-201ENST00000617595 124 ntBASIC5.65□□□□□ -1.5
HCN1O60741 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.65□□□□□ -1.5
HCN1O60741 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.65□□□□□ -1.5
HCN1O60741 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HCN1O60741 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.65□□□□□ -1.51
HCN1O60741 AC093671.1-201ENST00000624981 2929 ntBASIC5.65□□□□□ -1.51
HCN1O60741 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HCN1O60741 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 AC114876.1-201ENST00000490962 1366 ntBASIC5.65□□□□□ -1.51
HCN1O60741 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HCN1O60741 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.65□□□□□ -1.51
HCN1O60741 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HCN1O60741 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HCN1O60741 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
HCN1O60741 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HCN1O60741 RNU1-49P-201ENST00000363468 159 ntBASIC5.64□□□□□ -1.51
HCN1O60741 RN7SKP186-201ENST00000365371 303 ntBASIC5.64□□□□□ -1.51
HCN1O60741 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.64□□□□□ -1.51
HCN1O60741 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HCN1O60741 SNORA51.9-201ENST00000384295 124 ntBASIC5.64□□□□□ -1.51
HCN1O60741 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.64□□□□□ -1.51
HCN1O60741 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.64□□□□□ -1.51
HCN1O60741 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HCN1O60741 RPS7P14-201ENST00000426405 583 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms