Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 AC119674.1-202ENST00000641333 1860 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.53□□□□□ -1.52
ZIC3O60481 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.53□□□□□ -1.52
ZIC3O60481 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 RNU105B-201ENST00000364478 208 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 AP003170.5-201ENST00000397185 335 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AC245096.1-201ENST00000413104 546 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 RPS21P8-201ENST00000413365 247 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 MTND2P15-201ENST00000418575 892 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 AC115283.1-201ENST00000427353 400 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 ATP5LP2-201ENST00000440646 311 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 TRIM60P16-201ENST00000444048 694 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.53□□□□□ -1.52
ZIC3O60481 FTLP8-201ENST00000446770 267 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.53□□□□□ -1.52
ZIC3O60481 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
ZIC3O60481 PPIAP27-201ENST00000453800 265 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 MTND2P30-201ENST00000456663 382 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AC068228.1-201ENST00000461723 211 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 AC104629.1-201ENST00000494226 508 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.53□□□□□ -1.52
ZIC3O60481 PFN1P8-201ENST00000497012 543 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 LSM3P4-201ENST00000502948 309 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 OR4A40P-201ENST00000533878 948 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.53□□□□□ -1.52
ZIC3O60481 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.53□□□□□ -1.52
ZIC3O60481 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 AC020916.2-201ENST00000591242 360 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.53□□□□□ -1.52
ZIC3O60481 BNIP3P19-201ENST00000605397 577 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.53□□□□□ -1.52
ZIC3O60481 MIR6071-201ENST00000616741 78 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 AC004836.1-201ENST00000623032 634 ntBASIC5.53□□□□□ -1.52
ZIC3O60481 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ZIC3O60481 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
ZIC3O60481 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.53□□□□□ -1.52
ZIC3O60481 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.53□□□□□ -1.52
ZIC3O60481 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZIC3O60481 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZIC3O60481 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.52□□□□□ -1.53
ZIC3O60481 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZIC3O60481 AC006511.3-201ENST00000624929 1783 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZIC3O60481 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ZIC3O60481 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
ZIC3O60481 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZIC3O60481 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ZIC3O60481 AL049634.1-201ENST00000453770 1720 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 AC008627.1-201ENST00000517511 1704 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZIC3O60481 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ZIC3O60481 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZIC3O60481 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZIC3O60481 RN7SKP275-201ENST00000364626 301 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.52□□□□□ -1.53
ZIC3O60481 AC004386.1-201ENST00000393214 761 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 TMA16P2-201ENST00000413187 601 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.52□□□□□ -1.53
ZIC3O60481 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.52□□□□□ -1.53
ZIC3O60481 RPS15AP30-201ENST00000420976 390 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 ARAFP1-201ENST00000422172 605 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.52□□□□□ -1.53
ZIC3O60481 AC023141.6-201ENST00000429418 337 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.52□□□□□ -1.53
ZIC3O60481 GXYLT1P1-201ENST00000446657 490 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.52□□□□□ -1.53
ZIC3O60481 RPL23AP60-201ENST00000450011 454 ntBASIC5.52□□□□□ -1.53
ZIC3O60481 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.52□□□□□ -1.53
ZIC3O60481 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.52□□□□□ -1.53
ZIC3O60481 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms